- Region 'REG00000194' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.L170.28.v3...'
Transcript Model
Transcript Id
KH2012:KH.L170.28.v3.A.nonSL18-2
Possible name(s)
STRBP; ZFR; ZFR2
Gene model
Location
KhL170 [100,847 / 107,498]
Amino acid sequence
Length: 746
>KH.L170.28.v3.A.nonSL18-2
VIPYKMAANYFGFTSGGNNQQYNIGTTGNYGGNYGIQQQQQPAQNNYMQPPRAIQPPQQQ
TYVAYGHPTASGGASVPSTSYPNTYSYQSQQQQQQQQQTGFNKPAVQQSNQHQYYQQQQQ
PRNPPTQTNTANSSTAYFTNNNTQNSAMQIKQPAPQPVYNQPSPPVTSNFNQRQSQQSQQ
NISNYEKALINAASSIYQQHSTPTGVTGGGGASNLSAAYIKQLPYWKQKRLQQVKDPNKP
IVATEVKAYLYAWLSKKKARPDYNITAHGSHPYRQTYVCEIVVHGYDYVAKGSAGNKKDS
QTRAAWDFCDYLVREKLMTESELPIRDAKFAATNNKMPASYKPQSYQETKVGIAMKKALS
NKVNFVGGNTLHLSGGVNTVIKSTPTAYPPITSTSTPTFKAPTPANVPLMPPPPAPPVMK
PICQETIKEEIKDSAEIESKNAPVGEDYVTQVWTDGRVIRYRCKLCECEFNDPSAKALHI
RGRRHRLSYKKKVDPNIEVEVKLNPKQKSLMEMKMRMEAKKLYEQELYYRYKEELSLFEE
EVSYCRLSGTPVPPYLAPPNKPHLKFFRPNDANGNEGQLSRDDQLIMKKHKNIYPTPEEL
EAVQSTVQTVETAFKDVSRTIHEQEMKVFAASHGTRKRAQPQRLITAVVRVGELSKGLLL
TGDLHVALVLMCNVKPTKTMLNRVAGHLPKQLGNVSDENFVMKIMVEDAAILLATKSVPV
VTIRITLTSTSMRNPCPDAGMVPKKK
Nucleotide sequence
Length: 2,445
>KH2012:KH.L170.28.v3.A.nonSL18-2
ATATAATGCGAAAATCATTGTTTCTGACTCTTTGAAACACGTTTTTATAGGTTATTCCTT
ACAAAATGGCCGCAAATTACTTCGGATTCACTTCAGGAGGGAACAATCAACAATATAACA
TTGGTACCACTGGAAACTACGGTGGTAATTATGGAATACAACAGCAGCAGCAACCAGCAC
AAAATAACTATATGCAACCACCAAGAGCCATCCAGCCACCACAACAACAAACATACGTAG
CTTATGGACACCCAACTGCATCTGGAGGAGCATCTGTCCCATCTACATCTTATCCCAACA
CATACAGTTATCAAAGTCAACAACAGCAACAACAACAACAACAAACTGGATTCAACAAGC
CAGCTGTTCAACAAAGCAATCAACATCAATATTATCAACAACAACAACAACCAAGAAACC
CACCCACACAAACCAACACTGCCAATTCATCAACTGCCTATTTCACAAACAACAATACTC
AAAATAGCGCAATGCAGATTAAACAGCCAGCACCCCAGCCAGTGTATAACCAACCCAGCC
CTCCTGTTACATCTAATTTCAACCAACGACAGAGCCAACAATCACAACAAAACATATCTA
ACTATGAGAAAGCTCTCATCAACGCTGCTTCATCAATCTACCAACAACATTCAACACCAA
CTGGTGTAACAGGGGGAGGGGGAGCATCTAATCTAAGTGCTGCCTATATAAAGCAACTAC
CTTACTGGAAACAGAAGAGGTTACAGCAAGTCAAAGACCCCAACAAACCAATTGTAGCAA
CTGAAGTCAAAGCATATCTCTATGCTTGGTTAAGTAAGAAGAAAGCTCGTCCCGATTACA
ACATTACTGCACATGGTAGTCACCCGTACAGGCAAACCTATGTGTGCGAGATCGTTGTAC
ACGGATATGATTATGTAGCCAAGGGAAGCGCTGGAAACAAGAAAGATTCGCAAACAAGGG
CCGCGTGGGATTTCTGTGACTACCTGGTTCGTGAGAAACTAATGACAGAATCTGAACTTC
CAATTAGAGATGCCAAGTTTGCGGCAACCAACAACAAGATGCCAGCTTCATATAAACCAC
AAAGTTACCAGGAAACCAAAGTAGGCATCGCAATGAAGAAAGCTCTATCTAATAAAGTCA
ACTTTGTTGGTGGTAATACTCTTCATTTATCCGGAGGGGTAAATACAGTTATTAAAAGCA
CCCCCACTGCCTACCCACCCATCACCAGCACCTCTACCCCTACCTTCAAAGCCCCCACCC
CCGCAAATGTACCCCTAATGCCCCCGCCCCCTGCCCCGCCTGTCATGAAACCCATATGCC
AGGAAACAATCAAAGAAGAAATCAAAGATTCTGCAGAAATAGAAAGTAAAAATGCTCCAG
TAGGGGAGGATTATGTAACACAAGTATGGACGGACGGTCGGGTTATAAGGTATCGGTGTA
AATTATGTGAATGTGAGTTTAATGATCCGTCTGCAAAAGCTCTTCATATAAGAGGAAGAA
GGCACAGGCTTTCTTATAAGAAAAAAGTTGATCCAAATATAGAAGTTGAAGTGAAACTGA
ATCCTAAACAAAAAAGCTTGATGGAAATGAAAATGAGAATGGAAGCAAAAAAGCTTTATG
AGCAAGAGCTTTACTATCGATACAAGGAAGAACTGTCTTTATTTGAAGAAGAAGTTTCAT
ATTGTCGTTTATCTGGCACCCCTGTCCCCCCATACCTTGCACCACCGAATAAACCACATT
TGAAATTTTTTCGGCCAAATGATGCAAATGGGAATGAGGGTCAGCTTTCACGGGATGACC
AGCTTATCATGAAGAAGCATAAGAACATTTACCCAACACCAGAAGAACTGGAGGCAGTAC
AAAGTACTGTGCAGACGGTAGAAACTGCCTTCAAGGATGTGTCGCGTACAATTCATGAAC
AAGAGATGAAAGTATTTGCTGCCTCACACGGAACTCGTAAAAGAGCGCAACCTCAGCGAT
TGATCACTGCTGTTGTAAGAGTCGGTGAACTTTCTAAAGGTTTACTACTCACTGGTGACC
TGCATGTAGCATTGGTCCTTATGTGCAATGTCAAACCAACCAAAACAATGTTGAACAGGG
TGGCTGGTCATCTACCCAAGCAACTAGGGAATGTAAGTGATGAAAACTTTGTGATGAAAA
TCATGGTTGAAGACGCTGCTATTCTCCTTGCTACCAAATCTGTCCCAGTGGTCACCATTC
GCATCACTCTTACATCCACATCAATGAGAAACCCATGTCCGGATGCAGGTATGGTCCCTA
AGAAAAAATAAAAATATATTTTTAAACGCAAGCAGATTTTTTATAAGGAATTACAGTCAT
TTTTAAAAGAAAAATCTACTTTTTTTGAGTTGTTATAATTTATTTTTATCCGGTATAGAT
TTCGTATCTTAGCTTTAAGGGTTTGCATAAGGAGGTTTTATAATA
| ProSiteProfiles |
dsRBD_dom (IPR014720) - T[245-314] 12.718 |
| SMART |
dsRBD_dom (IPR014720) - T[246-313] 6.4E-7 |
| Pfam |
dsRBD_dom (IPR014720) - T[250-312] 2.2E-7 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[443-492] 2.44E-6 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[463-485] . |
| ProSiteProfiles |
DZF_dom (IPR006561) - T[568-746] 29.801 |
| Pfam |
DZF_dom (IPR006561) - T[650-734] 6.5E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZFR2_HUMAN | 38.679 % | 199 | 2.22E-53 |
| STRBP_HUMAN | 39.157 % | 116 | 8.27E-27 |
| ZFR_HUMAN | 36.406 % | 230 | 7.9E-64 |