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- Transcript 'KH2012:KH.C1.1144.v1...' >
- Transcript 'KH2012:KH.L170.28.v3...'
Transcript Model
Transcript Id
KH2012:KH.L170.28.v3.A.nonSL23-2
Possible name(s)
STRBP; ZFR; ZFR2
Gene model
Location
KhL170 [100,847 / 107,491]
Amino acid sequence
Length: 746
>KH.L170.28.v3.A.nonSL23-2
VIPYKMAANYFGFTSGGNNQQYNIGTTGNYGGNYGIQQQQQPAQNNYMQPPRAIQPPQQQ
TYVAYGHPTASGGASVPSTSYPNTYSYQSQQQQQQQQQTGFNKPAVQQSNQHQYYQQQQQ
PRNPPTQTNTANSSTAYFTNNNTQNSAMQIKQPAPQPVYNQPSPPVTSNFNQRQSQQSQQ
NISNYEKALINAASSIYQQHSTPTGVTGGGGASNLSAAYIKQLPYWKQKRLQQVKDPNKP
IVATEVKAYLYAWLSKKKARPDYNITAHGSHPYRQTYVCEIVVHGYDYVAKGSAGNKKDS
QTRAAWDFCDYLVREKLMTESELPIRDAKFAATNNKMPASYKPQSYQETKVGIAMKKALS
NKVNFVGGNTLHLSGGVNTVIKSTPTAYPPITSTSTPTFKAPTPANVPLMPPPPAPPVMK
PICQETIKEEIKDSAEIESKNAPVGEDYVTQVWTDGRVIRYRCKLCECEFNDPSAKALHI
RGRRHRLSYKKKVDPNIEVEVKLNPKQKSLMEMKMRMEAKKLYEQELYYRYKEELSLFEE
EVSYCRLSGTPVPPYLAPPNKPHLKFFRPNDANGNEGQLSRDDQLIMKKHKNIYPTPEEL
EAVQSTVQTVETAFKDVSRTIHEQEMKVFAASHGTRKRAQPQRLITAVVRVGELSKGLLL
TGDLHVALVLMCNVKPTKTMLNRVAGHLPKQLGNVSDENFVMKIMVEDAAILLATKSVPV
VTIRITLTSTSMRNPCPDAGMVPKKK
Nucleotide sequence
Length: 2,438
>KH2012:KH.L170.28.v3.A.nonSL23-2
GCGAAAATCATTGTTTCTGACTCTTTGAAACACGTTTTTATAGGTTATTCCTTACAAAAT
GGCCGCAAATTACTTCGGATTCACTTCAGGAGGGAACAATCAACAATATAACATTGGTAC
CACTGGAAACTACGGTGGTAATTATGGAATACAACAGCAGCAGCAACCAGCACAAAATAA
CTATATGCAACCACCAAGAGCCATCCAGCCACCACAACAACAAACATACGTAGCTTATGG
ACACCCAACTGCATCTGGAGGAGCATCTGTCCCATCTACATCTTATCCCAACACATACAG
TTATCAAAGTCAACAACAGCAACAACAACAACAACAAACTGGATTCAACAAGCCAGCTGT
TCAACAAAGCAATCAACATCAATATTATCAACAACAACAACAACCAAGAAACCCACCCAC
ACAAACCAACACTGCCAATTCATCAACTGCCTATTTCACAAACAACAATACTCAAAATAG
CGCAATGCAGATTAAACAGCCAGCACCCCAGCCAGTGTATAACCAACCCAGCCCTCCTGT
TACATCTAATTTCAACCAACGACAGAGCCAACAATCACAACAAAACATATCTAACTATGA
GAAAGCTCTCATCAACGCTGCTTCATCAATCTACCAACAACATTCAACACCAACTGGTGT
AACAGGGGGAGGGGGAGCATCTAATCTAAGTGCTGCCTATATAAAGCAACTACCTTACTG
GAAACAGAAGAGGTTACAGCAAGTCAAAGACCCCAACAAACCAATTGTAGCAACTGAAGT
CAAAGCATATCTCTATGCTTGGTTAAGTAAGAAGAAAGCTCGTCCCGATTACAACATTAC
TGCACATGGTAGTCACCCGTACAGGCAAACCTATGTGTGCGAGATCGTTGTACACGGATA
TGATTATGTAGCCAAGGGAAGCGCTGGAAACAAGAAAGATTCGCAAACAAGGGCCGCGTG
GGATTTCTGTGACTACCTGGTTCGTGAGAAACTAATGACAGAATCTGAACTTCCAATTAG
AGATGCCAAGTTTGCGGCAACCAACAACAAGATGCCAGCTTCATATAAACCACAAAGTTA
CCAGGAAACCAAAGTAGGCATCGCAATGAAGAAAGCTCTATCTAATAAAGTCAACTTTGT
TGGTGGTAATACTCTTCATTTATCCGGAGGGGTAAATACAGTTATTAAAAGCACCCCCAC
TGCCTACCCACCCATCACCAGCACCTCTACCCCTACCTTCAAAGCCCCCACCCCCGCAAA
TGTACCCCTAATGCCCCCGCCCCCTGCCCCGCCTGTCATGAAACCCATATGCCAGGAAAC
AATCAAAGAAGAAATCAAAGATTCTGCAGAAATAGAAAGTAAAAATGCTCCAGTAGGGGA
GGATTATGTAACACAAGTATGGACGGACGGTCGGGTTATAAGGTATCGGTGTAAATTATG
TGAATGTGAGTTTAATGATCCGTCTGCAAAAGCTCTTCATATAAGAGGAAGAAGGCACAG
GCTTTCTTATAAGAAAAAAGTTGATCCAAATATAGAAGTTGAAGTGAAACTGAATCCTAA
ACAAAAAAGCTTGATGGAAATGAAAATGAGAATGGAAGCAAAAAAGCTTTATGAGCAAGA
GCTTTACTATCGATACAAGGAAGAACTGTCTTTATTTGAAGAAGAAGTTTCATATTGTCG
TTTATCTGGCACCCCTGTCCCCCCATACCTTGCACCACCGAATAAACCACATTTGAAATT
TTTTCGGCCAAATGATGCAAATGGGAATGAGGGTCAGCTTTCACGGGATGACCAGCTTAT
CATGAAGAAGCATAAGAACATTTACCCAACACCAGAAGAACTGGAGGCAGTACAAAGTAC
TGTGCAGACGGTAGAAACTGCCTTCAAGGATGTGTCGCGTACAATTCATGAACAAGAGAT
GAAAGTATTTGCTGCCTCACACGGAACTCGTAAAAGAGCGCAACCTCAGCGATTGATCAC
TGCTGTTGTAAGAGTCGGTGAACTTTCTAAAGGTTTACTACTCACTGGTGACCTGCATGT
AGCATTGGTCCTTATGTGCAATGTCAAACCAACCAAAACAATGTTGAACAGGGTGGCTGG
TCATCTACCCAAGCAACTAGGGAATGTAAGTGATGAAAACTTTGTGATGAAAATCATGGT
TGAAGACGCTGCTATTCTCCTTGCTACCAAATCTGTCCCAGTGGTCACCATTCGCATCAC
TCTTACATCCACATCAATGAGAAACCCATGTCCGGATGCAGGTATGGTCCCTAAGAAAAA
ATAAAAATATATTTTTAAACGCAAGCAGATTTTTTATAAGGAATTACAGTCATTTTTAAA
AGAAAAATCTACTTTTTTTGAGTTGTTATAATTTATTTTTATCCGGTATAGATTTCGTAT
CTTAGCTTTAAGGGTTTGCATAAGGAGGTTTTATAATA
| ProSiteProfiles |
dsRBD_dom (IPR014720) - T[245-314] 12.718 |
| SMART |
dsRBD_dom (IPR014720) - T[246-313] 6.4E-7 |
| Pfam |
dsRBD_dom (IPR014720) - T[250-312] 2.2E-7 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[443-492] 2.44E-6 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[463-485] . |
| ProSiteProfiles |
DZF_dom (IPR006561) - T[568-746] 29.801 |
| Pfam |
DZF_dom (IPR006561) - T[650-734] 6.5E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZFR2_HUMAN | 38.679 % | 199 | 2.22E-53 |
| STRBP_HUMAN | 39.157 % | 116 | 8.27E-27 |
| ZFR_HUMAN | 36.406 % | 230 | 7.9E-64 |