- Transcript 'KH2012:KH.S899.5.v2....' >
- Transcript 'KH2012:KH.L9.2.v2.A....' >
- Transcript 'KH2012:KH.C3.199.v2....' >
- Transcript 'KH2012:KH.L170.28.v3...'
Transcript Model
Transcript Id
KH2012:KH.L170.28.v3.R.ND2-2
Possible name(s)
STRBP; ZFR; ZFR2
Gene model
Location
KhL170 [100,847 / 107,504]
Amino acid sequence
Length: 746
>KH.L170.28.v3.R.ND2-2
VIPYKMAANYFGFTSGGNNQQYNIGTTGNYGGNYGIQQQQQPAQNNYMQPPRAIQPPQQQ
TYVAYGHPTASGGASVPSTSYPNTYSYQSQQQQQQQQQTGFNKPAVQQSNQHQYYQQQQQ
PRNPPTQTNTANSSTAYFTNNNTQNSAMQIKQPAPQPVYNQPSPPVTSNFNQRQSQQSQQ
NISNYEKALINAASSIYQQHSTPTGVTGGGGASNLSAAYIKQLPYWKQKRLQQVKDPNKP
IVATEVKAYLYAWLSKKKARPDYNITAHGSHPYRQTYVCEIVVHGYDYVAKGSAGNKKDS
QTRAAWDFCDYLVREKLMTESELPIRDAKFAATNNKMPASYKPQSYQETKVGIAMKKALS
NKVNFVGGNTLHLSGGVNTVIKSTPTAYPPITSTSTPTFKAPTPANVPLMPPPPAPPVMK
PICQETIKEEIKDSAEIESKNAPVGEDYVTQVWTDGRVIRYRCKLCECEFNDPSAKALHI
RGRRHRLSYKKKVDPNIEVEVKLNPKQKSLMEMKMRMEAKKLYEQELYYRYKEELSLFEE
EVSYCRLSGTPVPPYLAPPNKPHLKFFRPNDANGNEGQLSRDDQLIMKKHKNIYPTPEEL
EAVQSTVQTVETAFKDVSRTIHEQEMKVFAASHGTRKRAQPQRLITAVVRVGELSKGLLL
TGDLHVALVLMCNVKPTKTMLNRVAGHLPKQLGNVSDENFVMKIMVEDAAILLATKSVPV
VTIRITLTSTSMRNPCPDAGMVPKKK
Nucleotide sequence
Length: 2,451
>KH2012:KH.L170.28.v3.R.ND2-2
GAGTGTATATAATGCGAAAATCATTGTTTCTGACTCTTTGAAACACGTTTTTATAGGTTA
TTCCTTACAAAATGGCCGCAAATTACTTCGGATTCACTTCAGGAGGGAACAATCAACAAT
ATAACATTGGTACCACTGGAAACTACGGTGGTAATTATGGAATACAACAGCAGCAGCAAC
CAGCACAAAATAACTATATGCAACCACCAAGAGCCATCCAGCCACCACAACAACAAACAT
ACGTAGCTTATGGACACCCAACTGCATCTGGAGGAGCATCTGTCCCATCTACATCTTATC
CCAACACATACAGTTATCAAAGTCAACAACAGCAACAACAACAACAACAAACTGGATTCA
ACAAGCCAGCTGTTCAACAAAGCAATCAACATCAATATTATCAACAACAACAACAACCAA
GAAACCCACCCACACAAACCAACACTGCCAATTCATCAACTGCCTATTTCACAAACAACA
ATACTCAAAATAGCGCAATGCAGATTAAACAGCCAGCACCCCAGCCAGTGTATAACCAAC
CCAGCCCTCCTGTTACATCTAATTTCAACCAACGACAGAGCCAACAATCACAACAAAACA
TATCTAACTATGAGAAAGCTCTCATCAACGCTGCTTCATCAATCTACCAACAACATTCAA
CACCAACTGGTGTAACAGGGGGAGGGGGAGCATCTAATCTAAGTGCTGCCTATATAAAGC
AACTACCTTACTGGAAACAGAAGAGGTTACAGCAAGTCAAAGACCCCAACAAACCAATTG
TAGCAACTGAAGTCAAAGCATATCTCTATGCTTGGTTAAGTAAGAAGAAAGCTCGTCCCG
ATTACAACATTACTGCACATGGTAGTCACCCGTACAGGCAAACCTATGTGTGCGAGATCG
TTGTACACGGATATGATTATGTAGCCAAGGGAAGCGCTGGAAACAAGAAAGATTCGCAAA
CAAGGGCCGCGTGGGATTTCTGTGACTACCTGGTTCGTGAGAAACTAATGACAGAATCTG
AACTTCCAATTAGAGATGCCAAGTTTGCGGCAACCAACAACAAGATGCCAGCTTCATATA
AACCACAAAGTTACCAGGAAACCAAAGTAGGCATCGCAATGAAGAAAGCTCTATCTAATA
AAGTCAACTTTGTTGGTGGTAATACTCTTCATTTATCCGGAGGGGTAAATACAGTTATTA
AAAGCACCCCCACTGCCTACCCACCCATCACCAGCACCTCTACCCCTACCTTCAAAGCCC
CCACCCCCGCAAATGTACCCCTAATGCCCCCGCCCCCTGCCCCGCCTGTCATGAAACCCA
TATGCCAGGAAACAATCAAAGAAGAAATCAAAGATTCTGCAGAAATAGAAAGTAAAAATG
CTCCAGTAGGGGAGGATTATGTAACACAAGTATGGACGGACGGTCGGGTTATAAGGTATC
GGTGTAAATTATGTGAATGTGAGTTTAATGATCCGTCTGCAAAAGCTCTTCATATAAGAG
GAAGAAGGCACAGGCTTTCTTATAAGAAAAAAGTTGATCCAAATATAGAAGTTGAAGTGA
AACTGAATCCTAAACAAAAAAGCTTGATGGAAATGAAAATGAGAATGGAAGCAAAAAAGC
TTTATGAGCAAGAGCTTTACTATCGATACAAGGAAGAACTGTCTTTATTTGAAGAAGAAG
TTTCATATTGTCGTTTATCTGGCACCCCTGTCCCCCCATACCTTGCACCACCGAATAAAC
CACATTTGAAATTTTTTCGGCCAAATGATGCAAATGGGAATGAGGGTCAGCTTTCACGGG
ATGACCAGCTTATCATGAAGAAGCATAAGAACATTTACCCAACACCAGAAGAACTGGAGG
CAGTACAAAGTACTGTGCAGACGGTAGAAACTGCCTTCAAGGATGTGTCGCGTACAATTC
ATGAACAAGAGATGAAAGTATTTGCTGCCTCACACGGAACTCGTAAAAGAGCGCAACCTC
AGCGATTGATCACTGCTGTTGTAAGAGTCGGTGAACTTTCTAAAGGTTTACTACTCACTG
GTGACCTGCATGTAGCATTGGTCCTTATGTGCAATGTCAAACCAACCAAAACAATGTTGA
ACAGGGTGGCTGGTCATCTACCCAAGCAACTAGGGAATGTAAGTGATGAAAACTTTGTGA
TGAAAATCATGGTTGAAGACGCTGCTATTCTCCTTGCTACCAAATCTGTCCCAGTGGTCA
CCATTCGCATCACTCTTACATCCACATCAATGAGAAACCCATGTCCGGATGCAGGTATGG
TCCCTAAGAAAAAATAAAAATATATTTTTAAACGCAAGCAGATTTTTTATAAGGAATTAC
AGTCATTTTTAAAAGAAAAATCTACTTTTTTTGAGTTGTTATAATTTATTTTTATCCGGT
ATAGATTTCGTATCTTAGCTTTAAGGGTTTGCATAAGGAGGTTTTATAATA
| ProSiteProfiles |
dsRBD_dom (IPR014720) - T[245-314] 12.718 |
| SMART |
dsRBD_dom (IPR014720) - T[246-313] 6.4E-7 |
| Pfam |
dsRBD_dom (IPR014720) - T[250-312] 2.2E-7 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[443-492] 2.44E-6 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[463-485] . |
| ProSiteProfiles |
DZF_dom (IPR006561) - T[568-746] 29.801 |
| Pfam |
DZF_dom (IPR006561) - T[650-734] 6.5E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZFR2_HUMAN | 38.679 % | 199 | 2.22E-53 |
| STRBP_HUMAN | 39.157 % | 116 | 8.27E-27 |
| ZFR_HUMAN | 36.406 % | 230 | 7.9E-64 |