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  1. Transcript 'KH2012:KH.L170.28.v4...'

Transcript Model

Transcript Id

KH2012:KH.L170.28.v4.A.nonSL14-1

Possible name(s)

STRBP; ZFR; ZFR2

Location

KhL170 [99,118 / 107,475]

Sequences

Amino acid sequence

Length: 950

>KH.L170.28.v4.A.nonSL14-1
VIPYKMAANYFGFTSGGNNQQYNIGTTGNYGGNYGIQQQQQPAQNNYMQPPRAIQPPQQQ
TYVAYGHPTASGGASVPSTSYPNTYSYQSQQQQQQQQQTGFNKPAVQQSNQHQYYQQQQQ
PRNPPTQTNTANSSTAYFTNNNTQNSAMQIKQPAPQPVYNQPSPPVTSNFNQRQSQQSQQ
NISNYEKALINAASSIYQQHSTPTGVTGGGGASNLSAAYIKQLPYWKQKRLQQVKDPNKP
IVATEVKAYLYAWLSKKKARPDYNITAHGSHPYRQTYVCEIVVHGYDYVAKGSAGNKKDS
QTRAAWDFCDYLVREKLMTESELPIRDAKFAATNNKMPASYKPQSYQETKVGIAMKKALS
NKVNFVGGNTLHLSGGVNTVIKSTPTAYPPITSTSTPTFKAPTPANVPLMPPPPAPPVMK
PICQETIKEEIKDSAEIESKNAPVGEDYVTQVWTDGRVIRYRCKLCECEFNDPSAKALHI
RGRRHRLSYKKKVDPNIEVEVKLNPKQKSLMEMKMRMEAKKEAAMEQQKKRMEWQMEMRK
REEEDIRLYEQELYYRYKEELSLFEEEVSYCRLSGTPVPPYLAPPNKPHLKFFRPNDANG
NEGQLSRDDQLIMKKHKNIYPTPEELEAVQSTVQTVETAFKDVSRTIHEQEMKVFAASHG
TRKRAQPQRLITAVVRVGELSKGLLLTGDLHVALVLMCNVKPTKTMLNRVAGHLPKQLGN
VSDENFVMKIMVEDAAILLATKSVPVVTIRITLTSTSMRNPCPDAEESATKNKKPDPPDI
LDSDKCCDALAALRRAKWFQAKVTPYHSCLVICRIFKDFATRYNQLVPLKSWAIELLTER
SYTSATSTLSPTSCLQRVLEVLSMGVLLPDGPGIRDPCEKEPTDAAGNLSLQQREDITTL
AQRLLRLVTFGKMFKILDLKYEPKPQVQKRSAENGEFDNTGVKKIKVEMH

Nucleotide sequence

Length: 3,026

>KH2012:KH.L170.28.v4.A.nonSL14-1
CTGACTCTTTGAAACACGTTTTTATAGGTTATTCCTTACAAAATGGCCGCAAATTACTTC
GGATTCACTTCAGGAGGGAACAATCAACAATATAACATTGGTACCACTGGAAACTACGGT
GGTAATTATGGAATACAACAGCAGCAGCAACCAGCACAAAATAACTATATGCAACCACCA
AGAGCCATCCAGCCACCACAACAACAAACATACGTAGCTTATGGACACCCAACTGCATCT
GGAGGAGCATCTGTCCCATCTACATCTTATCCCAACACATACAGTTATCAAAGTCAACAA
CAGCAACAACAACAACAACAAACTGGATTCAACAAGCCAGCTGTTCAACAAAGCAATCAA
CATCAATATTATCAACAACAACAACAACCAAGAAACCCACCCACACAAACCAACACTGCC
AATTCATCAACTGCCTATTTCACAAACAACAATACTCAAAATAGCGCAATGCAGATTAAA
CAGCCAGCACCCCAGCCAGTGTATAACCAACCCAGCCCTCCTGTTACATCTAATTTCAAC
CAACGACAGAGCCAACAATCACAACAAAACATATCTAACTATGAGAAAGCTCTCATCAAC
GCTGCTTCATCAATCTACCAACAACATTCAACACCAACTGGTGTAACAGGGGGAGGGGGA
GCATCTAATCTAAGTGCTGCCTATATAAAGCAACTACCTTACTGGAAACAGAAGAGGTTA
CAGCAAGTCAAAGACCCCAACAAACCAATTGTAGCAACTGAAGTCAAAGCATATCTCTAT
GCTTGGTTAAGTAAGAAGAAAGCTCGTCCCGATTACAACATTACTGCACATGGTAGTCAC
CCGTACAGGCAAACCTATGTGTGCGAGATCGTTGTACACGGATATGATTATGTAGCCAAG
GGAAGCGCTGGAAACAAGAAAGATTCGCAAACAAGGGCCGCGTGGGATTTCTGTGACTAC
CTGGTTCGTGAGAAACTAATGACAGAATCTGAACTTCCAATTAGAGATGCCAAGTTTGCG
GCAACCAACAACAAGATGCCAGCTTCATATAAACCACAAAGTTACCAGGAAACCAAAGTA
GGCATCGCAATGAAGAAAGCTCTATCTAATAAAGTCAACTTTGTTGGTGGTAATACTCTT
CATTTATCCGGAGGGGTAAATACAGTTATTAAAAGCACCCCCACTGCCTACCCACCCATC
ACCAGCACCTCTACCCCTACCTTCAAAGCCCCCACCCCCGCAAATGTACCCCTAATGCCC
CCGCCCCCTGCCCCGCCTGTCATGAAACCCATATGCCAGGAAACAATCAAAGAAGAAATC
AAAGATTCTGCAGAAATAGAAAGTAAAAATGCTCCAGTAGGGGAGGATTATGTAACACAA
GTATGGACGGACGGTCGGGTTATAAGGTATCGGTGTAAATTATGTGAATGTGAGTTTAAT
GATCCGTCTGCAAAAGCTCTTCATATAAGAGGAAGAAGGCACAGGCTTTCTTATAAGAAA
AAAGTTGATCCAAATATAGAAGTTGAAGTGAAACTGAATCCTAAACAAAAAAGCTTGATG
GAAATGAAAATGAGAATGGAAGCAAAAAAAGAGGCAGCGATGGAGCAACAGAAGAAGAGG
ATGGAATGGCAGATGGAGATGAGGAAGCGGGAGGAAGAAGACATCAGGCTTTATGAGCAA
GAGCTTTACTATCGATACAAGGAAGAACTGTCTTTATTTGAAGAAGAAGTTTCATATTGT
CGTTTATCTGGCACCCCTGTCCCCCCATACCTTGCACCACCGAATAAACCACATTTGAAA
TTTTTTCGGCCAAATGATGCAAATGGGAATGAGGGTCAGCTTTCACGGGATGACCAGCTT
ATCATGAAGAAGCATAAGAACATTTACCCAACACCAGAAGAACTGGAGGCAGTACAAAGT
ACTGTGCAGACGGTAGAAACTGCCTTCAAGGATGTGTCGCGTACAATTCATGAACAAGAG
ATGAAAGTATTTGCTGCCTCACACGGAACTCGTAAAAGAGCGCAACCTCAGCGATTGATC
ACTGCTGTTGTAAGAGTCGGTGAACTTTCTAAAGGTTTACTACTCACTGGTGACCTGCAT
GTAGCATTGGTCCTTATGTGCAATGTCAAACCAACCAAAACAATGTTGAACAGGGTGGCT
GGTCATCTACCCAAGCAACTAGGGAATGTAAGTGATGAAAACTTTGTGATGAAAATCATG
GTTGAAGACGCTGCTATTCTCCTTGCTACCAAATCTGTCCCAGTGGTCACCATTCGCATC
ACTCTTACATCCACATCAATGAGAAACCCATGTCCGGATGCAGAAGAGAGCGCAACAAAG
AATAAGAAGCCAGACCCACCAGACATTTTGGATTCAGACAAATGCTGCGACGCACTGGCC
GCGCTCCGTCGCGCCAAGTGGTTCCAGGCTAAAGTGACCCCATACCATTCTTGCCTTGTG
ATTTGTCGGATCTTTAAAGATTTTGCAACTCGCTACAATCAGTTGGTTCCTTTGAAAAGT
TGGGCGATTGAGCTTCTTACTGAGCGTTCCTACACAAGTGCGACGTCAACCTTGTCTCCA
ACAAGTTGCTTACAGCGCGTCCTTGAAGTTCTTTCCATGGGTGTTTTGCTGCCTGATGGT
CCTGGTATTCGAGATCCTTGTGAAAAAGAACCCACAGATGCTGCTGGTAACTTAAGTCTC
CAACAAAGGGAAGACATTACAACATTGGCTCAGCGGCTTTTGCGATTGGTAACTTTTGGC
AAAATGTTTAAAATTCTTGACCTTAAATATGAGCCAAAGCCGCAAGTGCAAAAACGAAGT
GCAGAAAATGGGGAGTTTGACAATACAGGAGTAAAGAAGATTAAAGTTGAAATGCATTAA
TTTCACACATCTGCTTCAATTTAACTGATGTGTAGTAAATTTGACAATTTTGAGAACTGT
TCTCATTCTGAATTGATATTATTTCAAATTGCGCAAGTAACACGAGCTTTGCATGGAAAA
TAAAGCCAAATTCGTTATAGTTGCAA

InterProScan

ProSiteProfiles
dsRBD_dom (IPR014720) - T[245-314] 12.718
SMART
dsRBD_dom (IPR014720) - T[246-313] 6.4E-7
Pfam
dsRBD_dom (IPR014720) - T[250-312] 3.0E-7
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[443-492] 3.27E-6
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[463-485] .
ProSiteProfiles
DZF_dom (IPR006561) - T[594-950] 76.075
SMART
DZF_dom (IPR006561) - T[670-927] 1.8E-77
Pfam
DZF_dom (IPR006561) - T[676-920] 1.2E-52

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZFR2_HUMAN 37.755 % 323 5.85E-96
STRBP_HUMAN 41.896 % 267 1.03E-77
ZFR_HUMAN 39.232 % 378 6.45E-115