- Transcript 'KH2012:KH.L170.28.v4...'
Transcript Model
Transcript Id
KH2012:KH.L170.28.v4.A.nonSL16-1
Possible name(s)
STRBP; ZFR; ZFR2
Gene model
Location
KhL170 [99,118 / 107,471]
Amino acid sequence
Length: 950
>KH.L170.28.v4.A.nonSL16-1
VIPYKMAANYFGFTSGGNNQQYNIGTTGNYGGNYGIQQQQQPAQNNYMQPPRAIQPPQQQ
TYVAYGHPTASGGASVPSTSYPNTYSYQSQQQQQQQQQTGFNKPAVQQSNQHQYYQQQQQ
PRNPPTQTNTANSSTAYFTNNNTQNSAMQIKQPAPQPVYNQPSPPVTSNFNQRQSQQSQQ
NISNYEKALINAASSIYQQHSTPTGVTGGGGASNLSAAYIKQLPYWKQKRLQQVKDPNKP
IVATEVKAYLYAWLSKKKARPDYNITAHGSHPYRQTYVCEIVVHGYDYVAKGSAGNKKDS
QTRAAWDFCDYLVREKLMTESELPIRDAKFAATNNKMPASYKPQSYQETKVGIAMKKALS
NKVNFVGGNTLHLSGGVNTVIKSTPTAYPPITSTSTPTFKAPTPANVPLMPPPPAPPVMK
PICQETIKEEIKDSAEIESKNAPVGEDYVTQVWTDGRVIRYRCKLCECEFNDPSAKALHI
RGRRHRLSYKKKVDPNIEVEVKLNPKQKSLMEMKMRMEAKKEAAMEQQKKRMEWQMEMRK
REEEDIRLYEQELYYRYKEELSLFEEEVSYCRLSGTPVPPYLAPPNKPHLKFFRPNDANG
NEGQLSRDDQLIMKKHKNIYPTPEELEAVQSTVQTVETAFKDVSRTIHEQEMKVFAASHG
TRKRAQPQRLITAVVRVGELSKGLLLTGDLHVALVLMCNVKPTKTMLNRVAGHLPKQLGN
VSDENFVMKIMVEDAAILLATKSVPVVTIRITLTSTSMRNPCPDAEESATKNKKPDPPDI
LDSDKCCDALAALRRAKWFQAKVTPYHSCLVICRIFKDFATRYNQLVPLKSWAIELLTER
SYTSATSTLSPTSCLQRVLEVLSMGVLLPDGPGIRDPCEKEPTDAAGNLSLQQREDITTL
AQRLLRLVTFGKMFKILDLKYEPKPQVQKRSAENGEFDNTGVKKIKVEMH
Nucleotide sequence
Length: 3,022
>KH2012:KH.L170.28.v4.A.nonSL16-1
CTCTTTGAAACACGTTTTTATAGGTTATTCCTTACAAAATGGCCGCAAATTACTTCGGAT
TCACTTCAGGAGGGAACAATCAACAATATAACATTGGTACCACTGGAAACTACGGTGGTA
ATTATGGAATACAACAGCAGCAGCAACCAGCACAAAATAACTATATGCAACCACCAAGAG
CCATCCAGCCACCACAACAACAAACATACGTAGCTTATGGACACCCAACTGCATCTGGAG
GAGCATCTGTCCCATCTACATCTTATCCCAACACATACAGTTATCAAAGTCAACAACAGC
AACAACAACAACAACAAACTGGATTCAACAAGCCAGCTGTTCAACAAAGCAATCAACATC
AATATTATCAACAACAACAACAACCAAGAAACCCACCCACACAAACCAACACTGCCAATT
CATCAACTGCCTATTTCACAAACAACAATACTCAAAATAGCGCAATGCAGATTAAACAGC
CAGCACCCCAGCCAGTGTATAACCAACCCAGCCCTCCTGTTACATCTAATTTCAACCAAC
GACAGAGCCAACAATCACAACAAAACATATCTAACTATGAGAAAGCTCTCATCAACGCTG
CTTCATCAATCTACCAACAACATTCAACACCAACTGGTGTAACAGGGGGAGGGGGAGCAT
CTAATCTAAGTGCTGCCTATATAAAGCAACTACCTTACTGGAAACAGAAGAGGTTACAGC
AAGTCAAAGACCCCAACAAACCAATTGTAGCAACTGAAGTCAAAGCATATCTCTATGCTT
GGTTAAGTAAGAAGAAAGCTCGTCCCGATTACAACATTACTGCACATGGTAGTCACCCGT
ACAGGCAAACCTATGTGTGCGAGATCGTTGTACACGGATATGATTATGTAGCCAAGGGAA
GCGCTGGAAACAAGAAAGATTCGCAAACAAGGGCCGCGTGGGATTTCTGTGACTACCTGG
TTCGTGAGAAACTAATGACAGAATCTGAACTTCCAATTAGAGATGCCAAGTTTGCGGCAA
CCAACAACAAGATGCCAGCTTCATATAAACCACAAAGTTACCAGGAAACCAAAGTAGGCA
TCGCAATGAAGAAAGCTCTATCTAATAAAGTCAACTTTGTTGGTGGTAATACTCTTCATT
TATCCGGAGGGGTAAATACAGTTATTAAAAGCACCCCCACTGCCTACCCACCCATCACCA
GCACCTCTACCCCTACCTTCAAAGCCCCCACCCCCGCAAATGTACCCCTAATGCCCCCGC
CCCCTGCCCCGCCTGTCATGAAACCCATATGCCAGGAAACAATCAAAGAAGAAATCAAAG
ATTCTGCAGAAATAGAAAGTAAAAATGCTCCAGTAGGGGAGGATTATGTAACACAAGTAT
GGACGGACGGTCGGGTTATAAGGTATCGGTGTAAATTATGTGAATGTGAGTTTAATGATC
CGTCTGCAAAAGCTCTTCATATAAGAGGAAGAAGGCACAGGCTTTCTTATAAGAAAAAAG
TTGATCCAAATATAGAAGTTGAAGTGAAACTGAATCCTAAACAAAAAAGCTTGATGGAAA
TGAAAATGAGAATGGAAGCAAAAAAAGAGGCAGCGATGGAGCAACAGAAGAAGAGGATGG
AATGGCAGATGGAGATGAGGAAGCGGGAGGAAGAAGACATCAGGCTTTATGAGCAAGAGC
TTTACTATCGATACAAGGAAGAACTGTCTTTATTTGAAGAAGAAGTTTCATATTGTCGTT
TATCTGGCACCCCTGTCCCCCCATACCTTGCACCACCGAATAAACCACATTTGAAATTTT
TTCGGCCAAATGATGCAAATGGGAATGAGGGTCAGCTTTCACGGGATGACCAGCTTATCA
TGAAGAAGCATAAGAACATTTACCCAACACCAGAAGAACTGGAGGCAGTACAAAGTACTG
TGCAGACGGTAGAAACTGCCTTCAAGGATGTGTCGCGTACAATTCATGAACAAGAGATGA
AAGTATTTGCTGCCTCACACGGAACTCGTAAAAGAGCGCAACCTCAGCGATTGATCACTG
CTGTTGTAAGAGTCGGTGAACTTTCTAAAGGTTTACTACTCACTGGTGACCTGCATGTAG
CATTGGTCCTTATGTGCAATGTCAAACCAACCAAAACAATGTTGAACAGGGTGGCTGGTC
ATCTACCCAAGCAACTAGGGAATGTAAGTGATGAAAACTTTGTGATGAAAATCATGGTTG
AAGACGCTGCTATTCTCCTTGCTACCAAATCTGTCCCAGTGGTCACCATTCGCATCACTC
TTACATCCACATCAATGAGAAACCCATGTCCGGATGCAGAAGAGAGCGCAACAAAGAATA
AGAAGCCAGACCCACCAGACATTTTGGATTCAGACAAATGCTGCGACGCACTGGCCGCGC
TCCGTCGCGCCAAGTGGTTCCAGGCTAAAGTGACCCCATACCATTCTTGCCTTGTGATTT
GTCGGATCTTTAAAGATTTTGCAACTCGCTACAATCAGTTGGTTCCTTTGAAAAGTTGGG
CGATTGAGCTTCTTACTGAGCGTTCCTACACAAGTGCGACGTCAACCTTGTCTCCAACAA
GTTGCTTACAGCGCGTCCTTGAAGTTCTTTCCATGGGTGTTTTGCTGCCTGATGGTCCTG
GTATTCGAGATCCTTGTGAAAAAGAACCCACAGATGCTGCTGGTAACTTAAGTCTCCAAC
AAAGGGAAGACATTACAACATTGGCTCAGCGGCTTTTGCGATTGGTAACTTTTGGCAAAA
TGTTTAAAATTCTTGACCTTAAATATGAGCCAAAGCCGCAAGTGCAAAAACGAAGTGCAG
AAAATGGGGAGTTTGACAATACAGGAGTAAAGAAGATTAAAGTTGAAATGCATTAATTTC
ACACATCTGCTTCAATTTAACTGATGTGTAGTAAATTTGACAATTTTGAGAACTGTTCTC
ATTCTGAATTGATATTATTTCAAATTGCGCAAGTAACACGAGCTTTGCATGGAAAATAAA
GCCAAATTCGTTATAGTTGCAA
| ProSiteProfiles |
dsRBD_dom (IPR014720) - T[245-314] 12.718 |
| SMART |
dsRBD_dom (IPR014720) - T[246-313] 6.4E-7 |
| Pfam |
dsRBD_dom (IPR014720) - T[250-312] 3.0E-7 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[443-492] 3.27E-6 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[463-485] . |
| ProSiteProfiles |
DZF_dom (IPR006561) - T[594-950] 76.075 |
| SMART |
DZF_dom (IPR006561) - T[670-927] 1.8E-77 |
| Pfam |
DZF_dom (IPR006561) - T[676-920] 1.2E-52 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZFR2_HUMAN | 37.755 % | 323 | 5.85E-96 |
| STRBP_HUMAN | 41.896 % | 267 | 1.03E-77 |
| ZFR_HUMAN | 39.232 % | 378 | 6.45E-115 |