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  1. Transcript 'KH2012:KH.L170.28.v4...'

Transcript Model

Transcript Id

KH2012:KH.L170.28.v4.A.nonSL24-1

Possible name(s)

STRBP; ZFR; ZFR2

Location

KhL170 [99,118 / 107,530]

Sequences

Amino acid sequence

Length: 950

>KH.L170.28.v4.A.nonSL24-1
VIPYKMAANYFGFTSGGNNQQYNIGTTGNYGGNYGIQQQQQPAQNNYMQPPRAIQPPQQQ
TYVAYGHPTASGGASVPSTSYPNTYSYQSQQQQQQQQQTGFNKPAVQQSNQHQYYQQQQQ
PRNPPTQTNTANSSTAYFTNNNTQNSAMQIKQPAPQPVYNQPSPPVTSNFNQRQSQQSQQ
NISNYEKALINAASSIYQQHSTPTGVTGGGGASNLSAAYIKQLPYWKQKRLQQVKDPNKP
IVATEVKAYLYAWLSKKKARPDYNITAHGSHPYRQTYVCEIVVHGYDYVAKGSAGNKKDS
QTRAAWDFCDYLVREKLMTESELPIRDAKFAATNNKMPASYKPQSYQETKVGIAMKKALS
NKVNFVGGNTLHLSGGVNTVIKSTPTAYPPITSTSTPTFKAPTPANVPLMPPPPAPPVMK
PICQETIKEEIKDSAEIESKNAPVGEDYVTQVWTDGRVIRYRCKLCECEFNDPSAKALHI
RGRRHRLSYKKKVDPNIEVEVKLNPKQKSLMEMKMRMEAKKEAAMEQQKKRMEWQMEMRK
REEEDIRLYEQELYYRYKEELSLFEEEVSYCRLSGTPVPPYLAPPNKPHLKFFRPNDANG
NEGQLSRDDQLIMKKHKNIYPTPEELEAVQSTVQTVETAFKDVSRTIHEQEMKVFAASHG
TRKRAQPQRLITAVVRVGELSKGLLLTGDLHVALVLMCNVKPTKTMLNRVAGHLPKQLGN
VSDENFVMKIMVEDAAILLATKSVPVVTIRITLTSTSMRNPCPDAEESATKNKKPDPPDI
LDSDKCCDALAALRRAKWFQAKVTPYHSCLVICRIFKDFATRYNQLVPLKSWAIELLTER
SYTSATSTLSPTSCLQRVLEVLSMGVLLPDGPGIRDPCEKEPTDAAGNLSLQQREDITTL
AQRLLRLVTFGKMFKILDLKYEPKPQVQKRSAENGEFDNTGVKKIKVEMH

Nucleotide sequence

Length: 3,081

>KH2012:KH.L170.28.v4.A.nonSL24-1
TCATTCCTGCATGCGCTGTTGTCGGCGAGTGTATATAATGCGAAAATCATTGTTTCTGAC
TCTTTGAAACACGTTTTTATAGGTTATTCCTTACAAAATGGCCGCAAATTACTTCGGATT
CACTTCAGGAGGGAACAATCAACAATATAACATTGGTACCACTGGAAACTACGGTGGTAA
TTATGGAATACAACAGCAGCAGCAACCAGCACAAAATAACTATATGCAACCACCAAGAGC
CATCCAGCCACCACAACAACAAACATACGTAGCTTATGGACACCCAACTGCATCTGGAGG
AGCATCTGTCCCATCTACATCTTATCCCAACACATACAGTTATCAAAGTCAACAACAGCA
ACAACAACAACAACAAACTGGATTCAACAAGCCAGCTGTTCAACAAAGCAATCAACATCA
ATATTATCAACAACAACAACAACCAAGAAACCCACCCACACAAACCAACACTGCCAATTC
ATCAACTGCCTATTTCACAAACAACAATACTCAAAATAGCGCAATGCAGATTAAACAGCC
AGCACCCCAGCCAGTGTATAACCAACCCAGCCCTCCTGTTACATCTAATTTCAACCAACG
ACAGAGCCAACAATCACAACAAAACATATCTAACTATGAGAAAGCTCTCATCAACGCTGC
TTCATCAATCTACCAACAACATTCAACACCAACTGGTGTAACAGGGGGAGGGGGAGCATC
TAATCTAAGTGCTGCCTATATAAAGCAACTACCTTACTGGAAACAGAAGAGGTTACAGCA
AGTCAAAGACCCCAACAAACCAATTGTAGCAACTGAAGTCAAAGCATATCTCTATGCTTG
GTTAAGTAAGAAGAAAGCTCGTCCCGATTACAACATTACTGCACATGGTAGTCACCCGTA
CAGGCAAACCTATGTGTGCGAGATCGTTGTACACGGATATGATTATGTAGCCAAGGGAAG
CGCTGGAAACAAGAAAGATTCGCAAACAAGGGCCGCGTGGGATTTCTGTGACTACCTGGT
TCGTGAGAAACTAATGACAGAATCTGAACTTCCAATTAGAGATGCCAAGTTTGCGGCAAC
CAACAACAAGATGCCAGCTTCATATAAACCACAAAGTTACCAGGAAACCAAAGTAGGCAT
CGCAATGAAGAAAGCTCTATCTAATAAAGTCAACTTTGTTGGTGGTAATACTCTTCATTT
ATCCGGAGGGGTAAATACAGTTATTAAAAGCACCCCCACTGCCTACCCACCCATCACCAG
CACCTCTACCCCTACCTTCAAAGCCCCCACCCCCGCAAATGTACCCCTAATGCCCCCGCC
CCCTGCCCCGCCTGTCATGAAACCCATATGCCAGGAAACAATCAAAGAAGAAATCAAAGA
TTCTGCAGAAATAGAAAGTAAAAATGCTCCAGTAGGGGAGGATTATGTAACACAAGTATG
GACGGACGGTCGGGTTATAAGGTATCGGTGTAAATTATGTGAATGTGAGTTTAATGATCC
GTCTGCAAAAGCTCTTCATATAAGAGGAAGAAGGCACAGGCTTTCTTATAAGAAAAAAGT
TGATCCAAATATAGAAGTTGAAGTGAAACTGAATCCTAAACAAAAAAGCTTGATGGAAAT
GAAAATGAGAATGGAAGCAAAAAAAGAGGCAGCGATGGAGCAACAGAAGAAGAGGATGGA
ATGGCAGATGGAGATGAGGAAGCGGGAGGAAGAAGACATCAGGCTTTATGAGCAAGAGCT
TTACTATCGATACAAGGAAGAACTGTCTTTATTTGAAGAAGAAGTTTCATATTGTCGTTT
ATCTGGCACCCCTGTCCCCCCATACCTTGCACCACCGAATAAACCACATTTGAAATTTTT
TCGGCCAAATGATGCAAATGGGAATGAGGGTCAGCTTTCACGGGATGACCAGCTTATCAT
GAAGAAGCATAAGAACATTTACCCAACACCAGAAGAACTGGAGGCAGTACAAAGTACTGT
GCAGACGGTAGAAACTGCCTTCAAGGATGTGTCGCGTACAATTCATGAACAAGAGATGAA
AGTATTTGCTGCCTCACACGGAACTCGTAAAAGAGCGCAACCTCAGCGATTGATCACTGC
TGTTGTAAGAGTCGGTGAACTTTCTAAAGGTTTACTACTCACTGGTGACCTGCATGTAGC
ATTGGTCCTTATGTGCAATGTCAAACCAACCAAAACAATGTTGAACAGGGTGGCTGGTCA
TCTACCCAAGCAACTAGGGAATGTAAGTGATGAAAACTTTGTGATGAAAATCATGGTTGA
AGACGCTGCTATTCTCCTTGCTACCAAATCTGTCCCAGTGGTCACCATTCGCATCACTCT
TACATCCACATCAATGAGAAACCCATGTCCGGATGCAGAAGAGAGCGCAACAAAGAATAA
GAAGCCAGACCCACCAGACATTTTGGATTCAGACAAATGCTGCGACGCACTGGCCGCGCT
CCGTCGCGCCAAGTGGTTCCAGGCTAAAGTGACCCCATACCATTCTTGCCTTGTGATTTG
TCGGATCTTTAAAGATTTTGCAACTCGCTACAATCAGTTGGTTCCTTTGAAAAGTTGGGC
GATTGAGCTTCTTACTGAGCGTTCCTACACAAGTGCGACGTCAACCTTGTCTCCAACAAG
TTGCTTACAGCGCGTCCTTGAAGTTCTTTCCATGGGTGTTTTGCTGCCTGATGGTCCTGG
TATTCGAGATCCTTGTGAAAAAGAACCCACAGATGCTGCTGGTAACTTAAGTCTCCAACA
AAGGGAAGACATTACAACATTGGCTCAGCGGCTTTTGCGATTGGTAACTTTTGGCAAAAT
GTTTAAAATTCTTGACCTTAAATATGAGCCAAAGCCGCAAGTGCAAAAACGAAGTGCAGA
AAATGGGGAGTTTGACAATACAGGAGTAAAGAAGATTAAAGTTGAAATGCATTAATTTCA
CACATCTGCTTCAATTTAACTGATGTGTAGTAAATTTGACAATTTTGAGAACTGTTCTCA
TTCTGAATTGATATTATTTCAAATTGCGCAAGTAACACGAGCTTTGCATGGAAAATAAAG
CCAAATTCGTTATAGTTGCAA

InterProScan

ProSiteProfiles
dsRBD_dom (IPR014720) - T[245-314] 12.718
SMART
dsRBD_dom (IPR014720) - T[246-313] 6.4E-7
Pfam
dsRBD_dom (IPR014720) - T[250-312] 3.0E-7
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[443-492] 3.27E-6
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[463-485] .
ProSiteProfiles
DZF_dom (IPR006561) - T[594-950] 76.075
SMART
DZF_dom (IPR006561) - T[670-927] 1.8E-77
Pfam
DZF_dom (IPR006561) - T[676-920] 1.2E-52

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZFR2_HUMAN 37.755 % 323 5.85E-96
STRBP_HUMAN 41.896 % 267 1.03E-77
ZFR_HUMAN 39.232 % 378 6.45E-115





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