- Transcript 'KH2012:KH.L170.28.v2...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C6.20.v2.A...' >
- Transcript 'KH2012:KH.L170.28.v5...'
Transcript Model
Transcript Id
KH2012:KH.L170.28.v5.A.nonSL11-2
Possible name(s)
STRBP; ZFR; ZFR2
Gene model
Location
KhL170 [100,847 / 107,465]
Amino acid sequence
Length: 772
>KH.L170.28.v5.A.nonSL11-2
VIPYKMAANYFGFTSGGNNQQYNIGTTGNYGGNYGIQQQQQPAQNNYMQPPRAIQPPQQQ
TYVAYGHPTASGGASVPSTSYPNTYSYQSQQQQQQQQQTGFNKPAVQQSNQHQYYQQQQQ
PRNPPTQTNTANSSTAYFTNNNTQNSAMQIKQPAPQPVYNQPSPPVTSNFNQRQSQQSQQ
NISNYEKALINAASSIYQQHSTPTGVTGGGGASNLSAAYIKQLPYWKQKRLQQVKDPNKP
IVATEVKAYLYAWLSKKKARPDYNITAHGSHPYRQTYVCEIVVHGYDYVAKGSAGNKKDS
QTRAAWDFCDYLVREKLMTESELPIRDAKFAATNNKMPASYKPQSYQETKVGIAMKKALS
NKVNFVGGNTLHLSGGVNTVIKSTPTAYPPITSTSTPTFKAPTPANVPLMPPPPAPPVMK
PICQETIKEEIKDSAEIESKNAPVGEDYVTQVWTDGRVIRYRCKLCECEFNDPSAKALHI
RGRRHRLSYKKKVDPNIEVEVKLNPKQKSLMEMKMRMEAKKEAAMEQQKKRMEWQMEMRK
REEEDIRLYEQELYYRYKEELSLFEEEVSYCRLSGTPVPPYLAPPNKPHLKFFRPNDANG
NEGQLSRDDQLIMKKHKNIYPTPEELEAVQSTVQTVETAFKDVSRTIHEQEMKVFAASHG
TRKRAQPQRLITAVVRVGELSKGLLLTGDLHVALVLMCNVKPTKTMLNRVAGHLPKQLGN
VSDENFVMKIMVEDAAILLATKSVPVVTIRITLTSTSMRNPCPDAGMVPKKK
Nucleotide sequence
Length: 2,490
>KH2012:KH.L170.28.v5.A.nonSL11-2
GAAACACGTTTTTATAGGTTATTCCTTACAAAATGGCCGCAAATTACTTCGGATTCACTT
CAGGAGGGAACAATCAACAATATAACATTGGTACCACTGGAAACTACGGTGGTAATTATG
GAATACAACAGCAGCAGCAACCAGCACAAAATAACTATATGCAACCACCAAGAGCCATCC
AGCCACCACAACAACAAACATACGTAGCTTATGGACACCCAACTGCATCTGGAGGAGCAT
CTGTCCCATCTACATCTTATCCCAACACATACAGTTATCAAAGTCAACAACAGCAACAAC
AACAACAACAAACTGGATTCAACAAGCCAGCTGTTCAACAAAGCAATCAACATCAATATT
ATCAACAACAACAACAACCAAGAAACCCACCCACACAAACCAACACTGCCAATTCATCAA
CTGCCTATTTCACAAACAACAATACTCAAAATAGCGCAATGCAGATTAAACAGCCAGCAC
CCCAGCCAGTGTATAACCAACCCAGCCCTCCTGTTACATCTAATTTCAACCAACGACAGA
GCCAACAATCACAACAAAACATATCTAACTATGAGAAAGCTCTCATCAACGCTGCTTCAT
CAATCTACCAACAACATTCAACACCAACTGGTGTAACAGGGGGAGGGGGAGCATCTAATC
TAAGTGCTGCCTATATAAAGCAACTACCTTACTGGAAACAGAAGAGGTTACAGCAAGTCA
AAGACCCCAACAAACCAATTGTAGCAACTGAAGTCAAAGCATATCTCTATGCTTGGTTAA
GTAAGAAGAAAGCTCGTCCCGATTACAACATTACTGCACATGGTAGTCACCCGTACAGGC
AAACCTATGTGTGCGAGATCGTTGTACACGGATATGATTATGTAGCCAAGGGAAGCGCTG
GAAACAAGAAAGATTCGCAAACAAGGGCCGCGTGGGATTTCTGTGACTACCTGGTTCGTG
AGAAACTAATGACAGAATCTGAACTTCCAATTAGAGATGCCAAGTTTGCGGCAACCAACA
ACAAGATGCCAGCTTCATATAAACCACAAAGTTACCAGGAAACCAAAGTAGGCATCGCAA
TGAAGAAAGCTCTATCTAATAAAGTCAACTTTGTTGGTGGTAATACTCTTCATTTATCCG
GAGGGGTAAATACAGTTATTAAAAGCACCCCCACTGCCTACCCACCCATCACCAGCACCT
CTACCCCTACCTTCAAAGCCCCCACCCCCGCAAATGTACCCCTAATGCCCCCGCCCCCTG
CCCCGCCTGTCATGAAACCCATATGCCAGGAAACAATCAAAGAAGAAATCAAAGATTCTG
CAGAAATAGAAAGTAAAAATGCTCCAGTAGGGGAGGATTATGTAACACAAGTATGGACGG
ACGGTCGGGTTATAAGGTATCGGTGTAAATTATGTGAATGTGAGTTTAATGATCCGTCTG
CAAAAGCTCTTCATATAAGAGGAAGAAGGCACAGGCTTTCTTATAAGAAAAAAGTTGATC
CAAATATAGAAGTTGAAGTGAAACTGAATCCTAAACAAAAAAGCTTGATGGAAATGAAAA
TGAGAATGGAAGCAAAAAAAGAGGCAGCGATGGAGCAACAGAAGAAGAGGATGGAATGGC
AGATGGAGATGAGGAAGCGGGAGGAAGAAGACATCAGGCTTTATGAGCAAGAGCTTTACT
ATCGATACAAGGAAGAACTGTCTTTATTTGAAGAAGAAGTTTCATATTGTCGTTTATCTG
GCACCCCTGTCCCCCCATACCTTGCACCACCGAATAAACCACATTTGAAATTTTTTCGGC
CAAATGATGCAAATGGGAATGAGGGTCAGCTTTCACGGGATGACCAGCTTATCATGAAGA
AGCATAAGAACATTTACCCAACACCAGAAGAACTGGAGGCAGTACAAAGTACTGTGCAGA
CGGTAGAAACTGCCTTCAAGGATGTGTCGCGTACAATTCATGAACAAGAGATGAAAGTAT
TTGCTGCCTCACACGGAACTCGTAAAAGAGCGCAACCTCAGCGATTGATCACTGCTGTTG
TAAGAGTCGGTGAACTTTCTAAAGGTTTACTACTCACTGGTGACCTGCATGTAGCATTGG
TCCTTATGTGCAATGTCAAACCAACCAAAACAATGTTGAACAGGGTGGCTGGTCATCTAC
CCAAGCAACTAGGGAATGTAAGTGATGAAAACTTTGTGATGAAAATCATGGTTGAAGACG
CTGCTATTCTCCTTGCTACCAAATCTGTCCCAGTGGTCACCATTCGCATCACTCTTACAT
CCACATCAATGAGAAACCCATGTCCGGATGCAGGTATGGTCCCTAAGAAAAAATAAAAAT
ATATTTTTAAACGCAAGCAGATTTTTTATAAGGAATTACAGTCATTTTTAAAAGAAAAAT
CTACTTTTTTTGAGTTGTTATAATTTATTTTTATCCGGTATAGATTTCGTATCTTAGCTT
TAAGGGTTTGCATAAGGAGGTTTTATAATA
| ProSiteProfiles |
dsRBD_dom (IPR014720) - T[245-314] 12.718 |
| SMART |
dsRBD_dom (IPR014720) - T[246-313] 6.4E-7 |
| Pfam |
dsRBD_dom (IPR014720) - T[250-312] 2.3E-7 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[443-492] 2.56E-6 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[463-485] . |
| ProSiteProfiles |
DZF_dom (IPR006561) - T[594-772] 29.801 |
| Pfam |
DZF_dom (IPR006561) - T[676-760] 6.8E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZFR2_HUMAN | 37.126 % | 194 | 7.15E-52 |
| STRBP_HUMAN | 39.157 % | 115 | 1.2E-26 |
| ZFR_HUMAN | 36.652 % | 228 | 6.94E-63 |