- Transcript 'KH2012:KH.C7.679.v1....' >
- Transcript 'KH2012:KH.C4.76.v1.A...' >
- Transcript 'KH2012:KH.C2.141.v1....' >
- Molecular Tool 'cicl50i22-MO' >
- Transcript 'KH2012:KH.L170.28.v5...'
Transcript Model
Transcript Id
KH2012:KH.L170.28.v5.A.nonSL14-2
Possible name(s)
STRBP; ZFR; ZFR2
Gene model
Location
KhL170 [100,847 / 107,475]
Amino acid sequence
Length: 772
>KH.L170.28.v5.A.nonSL14-2
VIPYKMAANYFGFTSGGNNQQYNIGTTGNYGGNYGIQQQQQPAQNNYMQPPRAIQPPQQQ
TYVAYGHPTASGGASVPSTSYPNTYSYQSQQQQQQQQQTGFNKPAVQQSNQHQYYQQQQQ
PRNPPTQTNTANSSTAYFTNNNTQNSAMQIKQPAPQPVYNQPSPPVTSNFNQRQSQQSQQ
NISNYEKALINAASSIYQQHSTPTGVTGGGGASNLSAAYIKQLPYWKQKRLQQVKDPNKP
IVATEVKAYLYAWLSKKKARPDYNITAHGSHPYRQTYVCEIVVHGYDYVAKGSAGNKKDS
QTRAAWDFCDYLVREKLMTESELPIRDAKFAATNNKMPASYKPQSYQETKVGIAMKKALS
NKVNFVGGNTLHLSGGVNTVIKSTPTAYPPITSTSTPTFKAPTPANVPLMPPPPAPPVMK
PICQETIKEEIKDSAEIESKNAPVGEDYVTQVWTDGRVIRYRCKLCECEFNDPSAKALHI
RGRRHRLSYKKKVDPNIEVEVKLNPKQKSLMEMKMRMEAKKEAAMEQQKKRMEWQMEMRK
REEEDIRLYEQELYYRYKEELSLFEEEVSYCRLSGTPVPPYLAPPNKPHLKFFRPNDANG
NEGQLSRDDQLIMKKHKNIYPTPEELEAVQSTVQTVETAFKDVSRTIHEQEMKVFAASHG
TRKRAQPQRLITAVVRVGELSKGLLLTGDLHVALVLMCNVKPTKTMLNRVAGHLPKQLGN
VSDENFVMKIMVEDAAILLATKSVPVVTIRITLTSTSMRNPCPDAGMVPKKK
Nucleotide sequence
Length: 2,500
>KH2012:KH.L170.28.v5.A.nonSL14-2
CTGACTCTTTGAAACACGTTTTTATAGGTTATTCCTTACAAAATGGCCGCAAATTACTTC
GGATTCACTTCAGGAGGGAACAATCAACAATATAACATTGGTACCACTGGAAACTACGGT
GGTAATTATGGAATACAACAGCAGCAGCAACCAGCACAAAATAACTATATGCAACCACCA
AGAGCCATCCAGCCACCACAACAACAAACATACGTAGCTTATGGACACCCAACTGCATCT
GGAGGAGCATCTGTCCCATCTACATCTTATCCCAACACATACAGTTATCAAAGTCAACAA
CAGCAACAACAACAACAACAAACTGGATTCAACAAGCCAGCTGTTCAACAAAGCAATCAA
CATCAATATTATCAACAACAACAACAACCAAGAAACCCACCCACACAAACCAACACTGCC
AATTCATCAACTGCCTATTTCACAAACAACAATACTCAAAATAGCGCAATGCAGATTAAA
CAGCCAGCACCCCAGCCAGTGTATAACCAACCCAGCCCTCCTGTTACATCTAATTTCAAC
CAACGACAGAGCCAACAATCACAACAAAACATATCTAACTATGAGAAAGCTCTCATCAAC
GCTGCTTCATCAATCTACCAACAACATTCAACACCAACTGGTGTAACAGGGGGAGGGGGA
GCATCTAATCTAAGTGCTGCCTATATAAAGCAACTACCTTACTGGAAACAGAAGAGGTTA
CAGCAAGTCAAAGACCCCAACAAACCAATTGTAGCAACTGAAGTCAAAGCATATCTCTAT
GCTTGGTTAAGTAAGAAGAAAGCTCGTCCCGATTACAACATTACTGCACATGGTAGTCAC
CCGTACAGGCAAACCTATGTGTGCGAGATCGTTGTACACGGATATGATTATGTAGCCAAG
GGAAGCGCTGGAAACAAGAAAGATTCGCAAACAAGGGCCGCGTGGGATTTCTGTGACTAC
CTGGTTCGTGAGAAACTAATGACAGAATCTGAACTTCCAATTAGAGATGCCAAGTTTGCG
GCAACCAACAACAAGATGCCAGCTTCATATAAACCACAAAGTTACCAGGAAACCAAAGTA
GGCATCGCAATGAAGAAAGCTCTATCTAATAAAGTCAACTTTGTTGGTGGTAATACTCTT
CATTTATCCGGAGGGGTAAATACAGTTATTAAAAGCACCCCCACTGCCTACCCACCCATC
ACCAGCACCTCTACCCCTACCTTCAAAGCCCCCACCCCCGCAAATGTACCCCTAATGCCC
CCGCCCCCTGCCCCGCCTGTCATGAAACCCATATGCCAGGAAACAATCAAAGAAGAAATC
AAAGATTCTGCAGAAATAGAAAGTAAAAATGCTCCAGTAGGGGAGGATTATGTAACACAA
GTATGGACGGACGGTCGGGTTATAAGGTATCGGTGTAAATTATGTGAATGTGAGTTTAAT
GATCCGTCTGCAAAAGCTCTTCATATAAGAGGAAGAAGGCACAGGCTTTCTTATAAGAAA
AAAGTTGATCCAAATATAGAAGTTGAAGTGAAACTGAATCCTAAACAAAAAAGCTTGATG
GAAATGAAAATGAGAATGGAAGCAAAAAAAGAGGCAGCGATGGAGCAACAGAAGAAGAGG
ATGGAATGGCAGATGGAGATGAGGAAGCGGGAGGAAGAAGACATCAGGCTTTATGAGCAA
GAGCTTTACTATCGATACAAGGAAGAACTGTCTTTATTTGAAGAAGAAGTTTCATATTGT
CGTTTATCTGGCACCCCTGTCCCCCCATACCTTGCACCACCGAATAAACCACATTTGAAA
TTTTTTCGGCCAAATGATGCAAATGGGAATGAGGGTCAGCTTTCACGGGATGACCAGCTT
ATCATGAAGAAGCATAAGAACATTTACCCAACACCAGAAGAACTGGAGGCAGTACAAAGT
ACTGTGCAGACGGTAGAAACTGCCTTCAAGGATGTGTCGCGTACAATTCATGAACAAGAG
ATGAAAGTATTTGCTGCCTCACACGGAACTCGTAAAAGAGCGCAACCTCAGCGATTGATC
ACTGCTGTTGTAAGAGTCGGTGAACTTTCTAAAGGTTTACTACTCACTGGTGACCTGCAT
GTAGCATTGGTCCTTATGTGCAATGTCAAACCAACCAAAACAATGTTGAACAGGGTGGCT
GGTCATCTACCCAAGCAACTAGGGAATGTAAGTGATGAAAACTTTGTGATGAAAATCATG
GTTGAAGACGCTGCTATTCTCCTTGCTACCAAATCTGTCCCAGTGGTCACCATTCGCATC
ACTCTTACATCCACATCAATGAGAAACCCATGTCCGGATGCAGGTATGGTCCCTAAGAAA
AAATAAAAATATATTTTTAAACGCAAGCAGATTTTTTATAAGGAATTACAGTCATTTTTA
AAAGAAAAATCTACTTTTTTTGAGTTGTTATAATTTATTTTTATCCGGTATAGATTTCGT
ATCTTAGCTTTAAGGGTTTGCATAAGGAGGTTTTATAATA
| ProSiteProfiles |
dsRBD_dom (IPR014720) - T[245-314] 12.718 |
| SMART |
dsRBD_dom (IPR014720) - T[246-313] 6.4E-7 |
| Pfam |
dsRBD_dom (IPR014720) - T[250-312] 2.3E-7 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[443-492] 2.56E-6 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[463-485] . |
| ProSiteProfiles |
DZF_dom (IPR006561) - T[594-772] 29.801 |
| Pfam |
DZF_dom (IPR006561) - T[676-760] 6.8E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZFR2_HUMAN | 37.126 % | 194 | 7.15E-52 |
| STRBP_HUMAN | 39.157 % | 115 | 1.2E-26 |
| ZFR_HUMAN | 36.652 % | 228 | 6.94E-63 |