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  1. Transcript 'KH2012:KH.C4.123.v1....'
  2. Transcript 'KH2012:KH.L135.2.v2....'
  3. Transcript 'KH2012:KH.C3.199.v2....'
  4. Transcript 'KH2012:KH.C5.278.v1....'
  5. Transcript 'KH2012:KH.L170.28.v5...'

Transcript Model

Transcript Id

KH2012:KH.L170.28.v5.A.nonSL25-2

Possible name(s)

STRBP; ZFR; ZFR2

Location

KhL170 [100,847 / 107,458]

Sequences

Amino acid sequence

Length: 772

>KH.L170.28.v5.A.nonSL25-2
VIPYKMAANYFGFTSGGNNQQYNIGTTGNYGGNYGIQQQQQPAQNNYMQPPRAIQPPQQQ
TYVAYGHPTASGGASVPSTSYPNTYSYQSQQQQQQQQQTGFNKPAVQQSNQHQYYQQQQQ
PRNPPTQTNTANSSTAYFTNNNTQNSAMQIKQPAPQPVYNQPSPPVTSNFNQRQSQQSQQ
NISNYEKALINAASSIYQQHSTPTGVTGGGGASNLSAAYIKQLPYWKQKRLQQVKDPNKP
IVATEVKAYLYAWLSKKKARPDYNITAHGSHPYRQTYVCEIVVHGYDYVAKGSAGNKKDS
QTRAAWDFCDYLVREKLMTESELPIRDAKFAATNNKMPASYKPQSYQETKVGIAMKKALS
NKVNFVGGNTLHLSGGVNTVIKSTPTAYPPITSTSTPTFKAPTPANVPLMPPPPAPPVMK
PICQETIKEEIKDSAEIESKNAPVGEDYVTQVWTDGRVIRYRCKLCECEFNDPSAKALHI
RGRRHRLSYKKKVDPNIEVEVKLNPKQKSLMEMKMRMEAKKEAAMEQQKKRMEWQMEMRK
REEEDIRLYEQELYYRYKEELSLFEEEVSYCRLSGTPVPPYLAPPNKPHLKFFRPNDANG
NEGQLSRDDQLIMKKHKNIYPTPEELEAVQSTVQTVETAFKDVSRTIHEQEMKVFAASHG
TRKRAQPQRLITAVVRVGELSKGLLLTGDLHVALVLMCNVKPTKTMLNRVAGHLPKQLGN
VSDENFVMKIMVEDAAILLATKSVPVVTIRITLTSTSMRNPCPDAGMVPKKK

Nucleotide sequence

Length: 2,483

>KH2012:KH.L170.28.v5.A.nonSL25-2
GTTTTTATAGGTTATTCCTTACAAAATGGCCGCAAATTACTTCGGATTCACTTCAGGAGG
GAACAATCAACAATATAACATTGGTACCACTGGAAACTACGGTGGTAATTATGGAATACA
ACAGCAGCAGCAACCAGCACAAAATAACTATATGCAACCACCAAGAGCCATCCAGCCACC
ACAACAACAAACATACGTAGCTTATGGACACCCAACTGCATCTGGAGGAGCATCTGTCCC
ATCTACATCTTATCCCAACACATACAGTTATCAAAGTCAACAACAGCAACAACAACAACA
ACAAACTGGATTCAACAAGCCAGCTGTTCAACAAAGCAATCAACATCAATATTATCAACA
ACAACAACAACCAAGAAACCCACCCACACAAACCAACACTGCCAATTCATCAACTGCCTA
TTTCACAAACAACAATACTCAAAATAGCGCAATGCAGATTAAACAGCCAGCACCCCAGCC
AGTGTATAACCAACCCAGCCCTCCTGTTACATCTAATTTCAACCAACGACAGAGCCAACA
ATCACAACAAAACATATCTAACTATGAGAAAGCTCTCATCAACGCTGCTTCATCAATCTA
CCAACAACATTCAACACCAACTGGTGTAACAGGGGGAGGGGGAGCATCTAATCTAAGTGC
TGCCTATATAAAGCAACTACCTTACTGGAAACAGAAGAGGTTACAGCAAGTCAAAGACCC
CAACAAACCAATTGTAGCAACTGAAGTCAAAGCATATCTCTATGCTTGGTTAAGTAAGAA
GAAAGCTCGTCCCGATTACAACATTACTGCACATGGTAGTCACCCGTACAGGCAAACCTA
TGTGTGCGAGATCGTTGTACACGGATATGATTATGTAGCCAAGGGAAGCGCTGGAAACAA
GAAAGATTCGCAAACAAGGGCCGCGTGGGATTTCTGTGACTACCTGGTTCGTGAGAAACT
AATGACAGAATCTGAACTTCCAATTAGAGATGCCAAGTTTGCGGCAACCAACAACAAGAT
GCCAGCTTCATATAAACCACAAAGTTACCAGGAAACCAAAGTAGGCATCGCAATGAAGAA
AGCTCTATCTAATAAAGTCAACTTTGTTGGTGGTAATACTCTTCATTTATCCGGAGGGGT
AAATACAGTTATTAAAAGCACCCCCACTGCCTACCCACCCATCACCAGCACCTCTACCCC
TACCTTCAAAGCCCCCACCCCCGCAAATGTACCCCTAATGCCCCCGCCCCCTGCCCCGCC
TGTCATGAAACCCATATGCCAGGAAACAATCAAAGAAGAAATCAAAGATTCTGCAGAAAT
AGAAAGTAAAAATGCTCCAGTAGGGGAGGATTATGTAACACAAGTATGGACGGACGGTCG
GGTTATAAGGTATCGGTGTAAATTATGTGAATGTGAGTTTAATGATCCGTCTGCAAAAGC
TCTTCATATAAGAGGAAGAAGGCACAGGCTTTCTTATAAGAAAAAAGTTGATCCAAATAT
AGAAGTTGAAGTGAAACTGAATCCTAAACAAAAAAGCTTGATGGAAATGAAAATGAGAAT
GGAAGCAAAAAAAGAGGCAGCGATGGAGCAACAGAAGAAGAGGATGGAATGGCAGATGGA
GATGAGGAAGCGGGAGGAAGAAGACATCAGGCTTTATGAGCAAGAGCTTTACTATCGATA
CAAGGAAGAACTGTCTTTATTTGAAGAAGAAGTTTCATATTGTCGTTTATCTGGCACCCC
TGTCCCCCCATACCTTGCACCACCGAATAAACCACATTTGAAATTTTTTCGGCCAAATGA
TGCAAATGGGAATGAGGGTCAGCTTTCACGGGATGACCAGCTTATCATGAAGAAGCATAA
GAACATTTACCCAACACCAGAAGAACTGGAGGCAGTACAAAGTACTGTGCAGACGGTAGA
AACTGCCTTCAAGGATGTGTCGCGTACAATTCATGAACAAGAGATGAAAGTATTTGCTGC
CTCACACGGAACTCGTAAAAGAGCGCAACCTCAGCGATTGATCACTGCTGTTGTAAGAGT
CGGTGAACTTTCTAAAGGTTTACTACTCACTGGTGACCTGCATGTAGCATTGGTCCTTAT
GTGCAATGTCAAACCAACCAAAACAATGTTGAACAGGGTGGCTGGTCATCTACCCAAGCA
ACTAGGGAATGTAAGTGATGAAAACTTTGTGATGAAAATCATGGTTGAAGACGCTGCTAT
TCTCCTTGCTACCAAATCTGTCCCAGTGGTCACCATTCGCATCACTCTTACATCCACATC
AATGAGAAACCCATGTCCGGATGCAGGTATGGTCCCTAAGAAAAAATAAAAATATATTTT
TAAACGCAAGCAGATTTTTTATAAGGAATTACAGTCATTTTTAAAAGAAAAATCTACTTT
TTTTGAGTTGTTATAATTTATTTTTATCCGGTATAGATTTCGTATCTTAGCTTTAAGGGT
TTGCATAAGGAGGTTTTATAATA

InterProScan

ProSiteProfiles
dsRBD_dom (IPR014720) - T[245-314] 12.718
SMART
dsRBD_dom (IPR014720) - T[246-313] 6.4E-7
Pfam
dsRBD_dom (IPR014720) - T[250-312] 2.3E-7
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[443-492] 2.56E-6
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[463-485] .
ProSiteProfiles
DZF_dom (IPR006561) - T[594-772] 29.801
Pfam
DZF_dom (IPR006561) - T[676-760] 6.8E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZFR2_HUMAN 37.126 % 194 7.15E-52
STRBP_HUMAN 39.157 % 115 1.2E-26
ZFR_HUMAN 36.652 % 228 6.94E-63





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