- Transcript 'Boleac.CG.SB_v3.S197...' >
- Transcript 'KH2012:KH.L170.28.v5...'
Transcript Model
Transcript Id
KH2012:KH.L170.28.v5.A.nonSL3-2
Possible name(s)
STRBP; ZFR; ZFR2
Gene model
Location
KhL170 [100,847 / 107,536]
Amino acid sequence
Length: 772
>KH.L170.28.v5.A.nonSL3-2
VIPYKMAANYFGFTSGGNNQQYNIGTTGNYGGNYGIQQQQQPAQNNYMQPPRAIQPPQQQ
TYVAYGHPTASGGASVPSTSYPNTYSYQSQQQQQQQQQTGFNKPAVQQSNQHQYYQQQQQ
PRNPPTQTNTANSSTAYFTNNNTQNSAMQIKQPAPQPVYNQPSPPVTSNFNQRQSQQSQQ
NISNYEKALINAASSIYQQHSTPTGVTGGGGASNLSAAYIKQLPYWKQKRLQQVKDPNKP
IVATEVKAYLYAWLSKKKARPDYNITAHGSHPYRQTYVCEIVVHGYDYVAKGSAGNKKDS
QTRAAWDFCDYLVREKLMTESELPIRDAKFAATNNKMPASYKPQSYQETKVGIAMKKALS
NKVNFVGGNTLHLSGGVNTVIKSTPTAYPPITSTSTPTFKAPTPANVPLMPPPPAPPVMK
PICQETIKEEIKDSAEIESKNAPVGEDYVTQVWTDGRVIRYRCKLCECEFNDPSAKALHI
RGRRHRLSYKKKVDPNIEVEVKLNPKQKSLMEMKMRMEAKKEAAMEQQKKRMEWQMEMRK
REEEDIRLYEQELYYRYKEELSLFEEEVSYCRLSGTPVPPYLAPPNKPHLKFFRPNDANG
NEGQLSRDDQLIMKKHKNIYPTPEELEAVQSTVQTVETAFKDVSRTIHEQEMKVFAASHG
TRKRAQPQRLITAVVRVGELSKGLLLTGDLHVALVLMCNVKPTKTMLNRVAGHLPKQLGN
VSDENFVMKIMVEDAAILLATKSVPVVTIRITLTSTSMRNPCPDAGMVPKKK
Nucleotide sequence
Length: 2,561
>KH2012:KH.L170.28.v5.A.nonSL3-2
AATTCCTCATTCCTGCATGCGCTGTTGTCGGCGAGTGTATATAATGCGAAAATCATTGTT
TCTGACTCTTTGAAACACGTTTTTATAGGTTATTCCTTACAAAATGGCCGCAAATTACTT
CGGATTCACTTCAGGAGGGAACAATCAACAATATAACATTGGTACCACTGGAAACTACGG
TGGTAATTATGGAATACAACAGCAGCAGCAACCAGCACAAAATAACTATATGCAACCACC
AAGAGCCATCCAGCCACCACAACAACAAACATACGTAGCTTATGGACACCCAACTGCATC
TGGAGGAGCATCTGTCCCATCTACATCTTATCCCAACACATACAGTTATCAAAGTCAACA
ACAGCAACAACAACAACAACAAACTGGATTCAACAAGCCAGCTGTTCAACAAAGCAATCA
ACATCAATATTATCAACAACAACAACAACCAAGAAACCCACCCACACAAACCAACACTGC
CAATTCATCAACTGCCTATTTCACAAACAACAATACTCAAAATAGCGCAATGCAGATTAA
ACAGCCAGCACCCCAGCCAGTGTATAACCAACCCAGCCCTCCTGTTACATCTAATTTCAA
CCAACGACAGAGCCAACAATCACAACAAAACATATCTAACTATGAGAAAGCTCTCATCAA
CGCTGCTTCATCAATCTACCAACAACATTCAACACCAACTGGTGTAACAGGGGGAGGGGG
AGCATCTAATCTAAGTGCTGCCTATATAAAGCAACTACCTTACTGGAAACAGAAGAGGTT
ACAGCAAGTCAAAGACCCCAACAAACCAATTGTAGCAACTGAAGTCAAAGCATATCTCTA
TGCTTGGTTAAGTAAGAAGAAAGCTCGTCCCGATTACAACATTACTGCACATGGTAGTCA
CCCGTACAGGCAAACCTATGTGTGCGAGATCGTTGTACACGGATATGATTATGTAGCCAA
GGGAAGCGCTGGAAACAAGAAAGATTCGCAAACAAGGGCCGCGTGGGATTTCTGTGACTA
CCTGGTTCGTGAGAAACTAATGACAGAATCTGAACTTCCAATTAGAGATGCCAAGTTTGC
GGCAACCAACAACAAGATGCCAGCTTCATATAAACCACAAAGTTACCAGGAAACCAAAGT
AGGCATCGCAATGAAGAAAGCTCTATCTAATAAAGTCAACTTTGTTGGTGGTAATACTCT
TCATTTATCCGGAGGGGTAAATACAGTTATTAAAAGCACCCCCACTGCCTACCCACCCAT
CACCAGCACCTCTACCCCTACCTTCAAAGCCCCCACCCCCGCAAATGTACCCCTAATGCC
CCCGCCCCCTGCCCCGCCTGTCATGAAACCCATATGCCAGGAAACAATCAAAGAAGAAAT
CAAAGATTCTGCAGAAATAGAAAGTAAAAATGCTCCAGTAGGGGAGGATTATGTAACACA
AGTATGGACGGACGGTCGGGTTATAAGGTATCGGTGTAAATTATGTGAATGTGAGTTTAA
TGATCCGTCTGCAAAAGCTCTTCATATAAGAGGAAGAAGGCACAGGCTTTCTTATAAGAA
AAAAGTTGATCCAAATATAGAAGTTGAAGTGAAACTGAATCCTAAACAAAAAAGCTTGAT
GGAAATGAAAATGAGAATGGAAGCAAAAAAAGAGGCAGCGATGGAGCAACAGAAGAAGAG
GATGGAATGGCAGATGGAGATGAGGAAGCGGGAGGAAGAAGACATCAGGCTTTATGAGCA
AGAGCTTTACTATCGATACAAGGAAGAACTGTCTTTATTTGAAGAAGAAGTTTCATATTG
TCGTTTATCTGGCACCCCTGTCCCCCCATACCTTGCACCACCGAATAAACCACATTTGAA
ATTTTTTCGGCCAAATGATGCAAATGGGAATGAGGGTCAGCTTTCACGGGATGACCAGCT
TATCATGAAGAAGCATAAGAACATTTACCCAACACCAGAAGAACTGGAGGCAGTACAAAG
TACTGTGCAGACGGTAGAAACTGCCTTCAAGGATGTGTCGCGTACAATTCATGAACAAGA
GATGAAAGTATTTGCTGCCTCACACGGAACTCGTAAAAGAGCGCAACCTCAGCGATTGAT
CACTGCTGTTGTAAGAGTCGGTGAACTTTCTAAAGGTTTACTACTCACTGGTGACCTGCA
TGTAGCATTGGTCCTTATGTGCAATGTCAAACCAACCAAAACAATGTTGAACAGGGTGGC
TGGTCATCTACCCAAGCAACTAGGGAATGTAAGTGATGAAAACTTTGTGATGAAAATCAT
GGTTGAAGACGCTGCTATTCTCCTTGCTACCAAATCTGTCCCAGTGGTCACCATTCGCAT
CACTCTTACATCCACATCAATGAGAAACCCATGTCCGGATGCAGGTATGGTCCCTAAGAA
AAAATAAAAATATATTTTTAAACGCAAGCAGATTTTTTATAAGGAATTACAGTCATTTTT
AAAAGAAAAATCTACTTTTTTTGAGTTGTTATAATTTATTTTTATCCGGTATAGATTTCG
TATCTTAGCTTTAAGGGTTTGCATAAGGAGGTTTTATAATA
| ProSiteProfiles |
dsRBD_dom (IPR014720) - T[245-314] 12.718 |
| SMART |
dsRBD_dom (IPR014720) - T[246-313] 6.4E-7 |
| Pfam |
dsRBD_dom (IPR014720) - T[250-312] 2.3E-7 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[443-492] 2.56E-6 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[463-485] . |
| ProSiteProfiles |
DZF_dom (IPR006561) - T[594-772] 29.801 |
| Pfam |
DZF_dom (IPR006561) - T[676-760] 6.8E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZFR2_HUMAN | 37.126 % | 194 | 7.15E-52 |
| STRBP_HUMAN | 39.157 % | 115 | 1.2E-26 |
| ZFR_HUMAN | 36.652 % | 228 | 6.94E-63 |