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  1. Transcript 'KH2012:KH.L170.28.v5...'

Transcript Model

Transcript Id

KH2012:KH.L170.28.v5.A.nonSL7-2

Possible name(s)

STRBP; ZFR; ZFR2

Location

KhL170 [100,847 / 107,528]

Sequences

Amino acid sequence

Length: 772

>KH.L170.28.v5.A.nonSL7-2
VIPYKMAANYFGFTSGGNNQQYNIGTTGNYGGNYGIQQQQQPAQNNYMQPPRAIQPPQQQ
TYVAYGHPTASGGASVPSTSYPNTYSYQSQQQQQQQQQTGFNKPAVQQSNQHQYYQQQQQ
PRNPPTQTNTANSSTAYFTNNNTQNSAMQIKQPAPQPVYNQPSPPVTSNFNQRQSQQSQQ
NISNYEKALINAASSIYQQHSTPTGVTGGGGASNLSAAYIKQLPYWKQKRLQQVKDPNKP
IVATEVKAYLYAWLSKKKARPDYNITAHGSHPYRQTYVCEIVVHGYDYVAKGSAGNKKDS
QTRAAWDFCDYLVREKLMTESELPIRDAKFAATNNKMPASYKPQSYQETKVGIAMKKALS
NKVNFVGGNTLHLSGGVNTVIKSTPTAYPPITSTSTPTFKAPTPANVPLMPPPPAPPVMK
PICQETIKEEIKDSAEIESKNAPVGEDYVTQVWTDGRVIRYRCKLCECEFNDPSAKALHI
RGRRHRLSYKKKVDPNIEVEVKLNPKQKSLMEMKMRMEAKKEAAMEQQKKRMEWQMEMRK
REEEDIRLYEQELYYRYKEELSLFEEEVSYCRLSGTPVPPYLAPPNKPHLKFFRPNDANG
NEGQLSRDDQLIMKKHKNIYPTPEELEAVQSTVQTVETAFKDVSRTIHEQEMKVFAASHG
TRKRAQPQRLITAVVRVGELSKGLLLTGDLHVALVLMCNVKPTKTMLNRVAGHLPKQLGN
VSDENFVMKIMVEDAAILLATKSVPVVTIRITLTSTSMRNPCPDAGMVPKKK

Nucleotide sequence

Length: 2,553

>KH2012:KH.L170.28.v5.A.nonSL7-2
ATTCCTGCATGCGCTGTTGTCGGCGAGTGTATATAATGCGAAAATCATTGTTTCTGACTC
TTTGAAACACGTTTTTATAGGTTATTCCTTACAAAATGGCCGCAAATTACTTCGGATTCA
CTTCAGGAGGGAACAATCAACAATATAACATTGGTACCACTGGAAACTACGGTGGTAATT
ATGGAATACAACAGCAGCAGCAACCAGCACAAAATAACTATATGCAACCACCAAGAGCCA
TCCAGCCACCACAACAACAAACATACGTAGCTTATGGACACCCAACTGCATCTGGAGGAG
CATCTGTCCCATCTACATCTTATCCCAACACATACAGTTATCAAAGTCAACAACAGCAAC
AACAACAACAACAAACTGGATTCAACAAGCCAGCTGTTCAACAAAGCAATCAACATCAAT
ATTATCAACAACAACAACAACCAAGAAACCCACCCACACAAACCAACACTGCCAATTCAT
CAACTGCCTATTTCACAAACAACAATACTCAAAATAGCGCAATGCAGATTAAACAGCCAG
CACCCCAGCCAGTGTATAACCAACCCAGCCCTCCTGTTACATCTAATTTCAACCAACGAC
AGAGCCAACAATCACAACAAAACATATCTAACTATGAGAAAGCTCTCATCAACGCTGCTT
CATCAATCTACCAACAACATTCAACACCAACTGGTGTAACAGGGGGAGGGGGAGCATCTA
ATCTAAGTGCTGCCTATATAAAGCAACTACCTTACTGGAAACAGAAGAGGTTACAGCAAG
TCAAAGACCCCAACAAACCAATTGTAGCAACTGAAGTCAAAGCATATCTCTATGCTTGGT
TAAGTAAGAAGAAAGCTCGTCCCGATTACAACATTACTGCACATGGTAGTCACCCGTACA
GGCAAACCTATGTGTGCGAGATCGTTGTACACGGATATGATTATGTAGCCAAGGGAAGCG
CTGGAAACAAGAAAGATTCGCAAACAAGGGCCGCGTGGGATTTCTGTGACTACCTGGTTC
GTGAGAAACTAATGACAGAATCTGAACTTCCAATTAGAGATGCCAAGTTTGCGGCAACCA
ACAACAAGATGCCAGCTTCATATAAACCACAAAGTTACCAGGAAACCAAAGTAGGCATCG
CAATGAAGAAAGCTCTATCTAATAAAGTCAACTTTGTTGGTGGTAATACTCTTCATTTAT
CCGGAGGGGTAAATACAGTTATTAAAAGCACCCCCACTGCCTACCCACCCATCACCAGCA
CCTCTACCCCTACCTTCAAAGCCCCCACCCCCGCAAATGTACCCCTAATGCCCCCGCCCC
CTGCCCCGCCTGTCATGAAACCCATATGCCAGGAAACAATCAAAGAAGAAATCAAAGATT
CTGCAGAAATAGAAAGTAAAAATGCTCCAGTAGGGGAGGATTATGTAACACAAGTATGGA
CGGACGGTCGGGTTATAAGGTATCGGTGTAAATTATGTGAATGTGAGTTTAATGATCCGT
CTGCAAAAGCTCTTCATATAAGAGGAAGAAGGCACAGGCTTTCTTATAAGAAAAAAGTTG
ATCCAAATATAGAAGTTGAAGTGAAACTGAATCCTAAACAAAAAAGCTTGATGGAAATGA
AAATGAGAATGGAAGCAAAAAAAGAGGCAGCGATGGAGCAACAGAAGAAGAGGATGGAAT
GGCAGATGGAGATGAGGAAGCGGGAGGAAGAAGACATCAGGCTTTATGAGCAAGAGCTTT
ACTATCGATACAAGGAAGAACTGTCTTTATTTGAAGAAGAAGTTTCATATTGTCGTTTAT
CTGGCACCCCTGTCCCCCCATACCTTGCACCACCGAATAAACCACATTTGAAATTTTTTC
GGCCAAATGATGCAAATGGGAATGAGGGTCAGCTTTCACGGGATGACCAGCTTATCATGA
AGAAGCATAAGAACATTTACCCAACACCAGAAGAACTGGAGGCAGTACAAAGTACTGTGC
AGACGGTAGAAACTGCCTTCAAGGATGTGTCGCGTACAATTCATGAACAAGAGATGAAAG
TATTTGCTGCCTCACACGGAACTCGTAAAAGAGCGCAACCTCAGCGATTGATCACTGCTG
TTGTAAGAGTCGGTGAACTTTCTAAAGGTTTACTACTCACTGGTGACCTGCATGTAGCAT
TGGTCCTTATGTGCAATGTCAAACCAACCAAAACAATGTTGAACAGGGTGGCTGGTCATC
TACCCAAGCAACTAGGGAATGTAAGTGATGAAAACTTTGTGATGAAAATCATGGTTGAAG
ACGCTGCTATTCTCCTTGCTACCAAATCTGTCCCAGTGGTCACCATTCGCATCACTCTTA
CATCCACATCAATGAGAAACCCATGTCCGGATGCAGGTATGGTCCCTAAGAAAAAATAAA
AATATATTTTTAAACGCAAGCAGATTTTTTATAAGGAATTACAGTCATTTTTAAAAGAAA
AATCTACTTTTTTTGAGTTGTTATAATTTATTTTTATCCGGTATAGATTTCGTATCTTAG
CTTTAAGGGTTTGCATAAGGAGGTTTTATAATA

InterProScan

ProSiteProfiles
dsRBD_dom (IPR014720) - T[245-314] 12.718
SMART
dsRBD_dom (IPR014720) - T[246-313] 6.4E-7
Pfam
dsRBD_dom (IPR014720) - T[250-312] 2.3E-7
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[443-492] 2.56E-6
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[463-485] .
ProSiteProfiles
DZF_dom (IPR006561) - T[594-772] 29.801
Pfam
DZF_dom (IPR006561) - T[676-760] 6.8E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZFR2_HUMAN 37.126 % 194 7.15E-52
STRBP_HUMAN 39.157 % 115 1.2E-26
ZFR_HUMAN 36.652 % 228 6.94E-63





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