Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L170.59.v1.A.nonSL8-1

Possible name(s)

DNAJB1; DNAJB4; DNAJB5

Gene model

KH2012:KH.L170.59

Location

KhL170 [195,281 / 197,785]

Sequences

Amino acid sequence

Length: 355

>KH.L170.59.v1.A.nonSL8-1
SKTEMMGKDYYKVLGISKSASEDEIKKAYRKLALKYHPDKNKSASAEEKFKEIAEAYEVL
SDPEKKKMYDTHGEQGLNGGMSKDGDSYSYSFHGDPKATFEAFFGTSNPFASFFGGQNDV
EDMMFENSDGSFGQGGDGMHFGPGSFFQSNFSRGSPRHRADNVSCQFSQRGQPTQDPPIH
CDLKCSLEDIYKGGSRKMKITRKRLNPDGYSTRNEDKILNIDIKKGWKEGTKITFPKEGD
EKPNTIPADIVFTLKDTEHDKFKRDGSNIIYTDTVTLKQALTGFTAMIPTLDNGRNIPLP
CTDIIKPDTQKRIRGEGLPLPKQPHRRGDLLVNFNIVFPDYLTRQNKNVLKDVLP

Nucleotide sequence

Length: 1,589

>KH2012:KH.L170.59.v1.A.nonSL8-1
AGAAATGAAGATGTGTGGTGCCAGCTGTTCATACGTGCGACAGAACAAGAATTAACAATA
CAGATTGCTTATATAGGTATTGTTTTATAACCTAGGGAAGCAATAGAGCTTTGCAGACGG
TTATAAGCGTTAACAAAGTAAAGGAAATAGAATCGTTTCGTTTTTAAGAAAATACTGAAG
CAAAACTGAAATGATGGGAAAAGATTATTACAAAGTCCTCGGTATCTCAAAATCGGCGAG
TGAAGATGAGATTAAAAAAGCTTACAGAAAACTTGCTTTGAAATACCATCCTGACAAAAA
CAAGAGTGCAAGCGCTGAGGAAAAGTTTAAAGAGATTGCTGAGGCTTATGAAGTACTTAG
CGACCCTGAGAAAAAGAAAATGTATGACACTCATGGAGAACAAGGGTTGAATGGTGGTAT
GTCAAAAGATGGGGACTCTTACTCATATTCCTTCCATGGGGACCCGAAAGCAACATTTGA
AGCGTTTTTCGGCACTTCAAACCCATTTGCGAGCTTTTTCGGAGGCCAGAACGACGTTGA
AGACATGATGTTTGAAAATTCGGATGGTTCATTTGGTCAAGGAGGTGATGGGATGCACTT
TGGACCAGGCAGCTTCTTTCAGTCTAACTTTTCAAGGGGCTCCCCAAGGCACAGAGCGGA
TAATGTCTCATGCCAGTTCTCCCAGCGTGGCCAGCCAACCCAGGACCCTCCAATACATTG
CGATTTAAAGTGTTCCCTTGAGGACATATACAAAGGAGGTTCAAGGAAAATGAAGATTAC
TCGCAAACGACTCAATCCTGATGGATATTCAACAAGAAATGAAGACAAAATATTAAACAT
CGATATCAAGAAAGGCTGGAAGGAAGGAACAAAAATAACGTTCCCAAAAGAAGGCGATGA
AAAACCGAACACAATCCCCGCTGATATTGTGTTTACATTGAAAGACACAGAGCATGACAA
GTTTAAAAGGGATGGCAGCAACATTATATATACAGACACTGTTACATTAAAACAGGCTCT
TACTGGATTTACAGCAATGATCCCAACACTGGACAACGGTCGTAACATCCCGTTACCTTG
TACTGATATCATTAAACCAGATACACAGAAGCGAATAAGAGGAGAAGGGCTACCATTACC
CAAGCAGCCGCACAGAAGAGGCGACCTGCTTGTCAACTTTAACATTGTATTCCCAGACTA
CCTCACACGGCAGAACAAAAATGTTTTAAAAGATGTCCTACCGTAGAAACGCTTTGTATT
TATGCGATGTTTAAATTGCCTATATTGGTTGTTACAGTTATTATATTTAATATTTTAGTA
TTCATATTTTAATCAAAGTTGTTTTGTTTGTGCAATACTGTGCGCAAAATACTGAATCCT
TGAATTTGTGTTCTTTTACCAAAATATTTCACTACTAACTACAGATTATAAATGTTGACA
AAGCTTTAGTTTGAGCGTTATGAATCACAAATCCTGCTTTGTTGCATATTGTTTATTGCT
TAGTGGTGGTATGAGTAACTGTATTACGAGTTTTTGGACGAGCGATTTTGTTCTCTTTAT
GTTAAATAAAAAAACTCTTATTAAATTGA

InterProScan

Gene3D	J_dom_sf (IPR036869) - T[6-120] 8.1E-38
SUPERFAMILY	J_dom_sf (IPR036869) - T[8-114] 1.44E-34
SMART	DnaJ_domain (IPR001623) - T[8-65] 2.5E-34
ProSiteProfiles	DnaJ_domain (IPR001623) - T[9-73] 25.621
Pfam	DnaJ_domain (IPR001623) - T[9-70] 2.0E-29
CDD	DnaJ_domain (IPR001623) - T[9-62] 9.63134E-29
PRINTS	DnaJ_domain (IPR001623) - T[11-29] 3.0E-31 - T[29-44] 3.0E-31 - T[45-65] 3.0E-31 - T[65-84] 3.0E-31
ProSitePatterns	DnaJ_domain_CS (IPR018253) - T[50-69] .
SUPERFAMILY	HSP40/DnaJ_pept-bd (IPR008971) - T[178-259] 3.14E-15 - T[262-350] 8.76E-21
Pfam	DnaJ_C (IPR002939) - T[179-339] 6.2E-42

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
DNJB4_HUMAN	55.462 %	369	1.31E-127
DNJB1_HUMAN	52.941 %	360	4.12E-124
DNJB5_HUMAN	55.807 %	374	1.33E-129