- Clone 'cien203265' >
- Transcript 'KH2012:KH.L171.13.v3...'
Transcript Model
Transcript Id
KH2012:KH.L171.13.v3.A.nonSL1-1
Possible name(s)
OPN1LW; OPN1MW2; OPN1MW3
Gene model
Location
KhL171 [206,362 / 208,520]
Amino acid sequence
Length: 402
>KH.L171.13.v3.A.nonSL1-1
INHYLAGNKRSIMNQWLETIMNERKFEIVNSSLQGLLKPDSLGMDHDVTPTVDLTDGVPQ
CKDLNPYVLKGDGWVPQHISRANRSTYSFLCVYMTFVFLLSCSLNILVIVATLKNKVLRQ
PLNYIIVNLAVVDLLSGFVGGFISIAANGAGYFFWGKTMCQIEGYFVSNFGVTGLLSIAV
MAFERYFVICKPFGPVRFEEKHSIFGIVITWVWSMFWNTPPLIFWDGYDTEGLGTSCAPN
WFVKEKRERLFIILYFVFCFVIPLAVIMICYGKLILTLRQIAKESSLSGGTSPEGEVTKM
VVVMVTAFVFCWLPYAAFAMYNVVNPEAQIDYALGAAPAFFAKTATIYNPLIYIGLNRQF
RDCVVRMIFNGRNPWVDELVGSQVSSTGSQLTAVSSNKVAPA
Nucleotide sequence
Length: 1,508
>KH2012:KH.L171.13.v3.A.nonSL1-1
ACATAAACCATTATTTAGCAGGAAATAAACGCAGCATTATGAATCAGTGGTTGGAAACCA
TTATGAATGAAAGGAAGTTCGAAATTGTGAACAGCTCGCTACAGGGTTTGTTAAAACCGG
ATTCACTGGGTATGGATCATGACGTAACACCAACTGTTGACTTGACTGACGGAGTTCCAC
AATGTAAAGATCTTAACCCTTACGTACTAAAAGGAGATGGTTGGGTGCCTCAACATATAA
GTCGGGCCAATCGTTCAACGTATAGTTTCCTTTGTGTTTACATGACATTTGTCTTTCTGC
TGTCTTGTTCTCTCAACATCCTTGTTATAGTGGCCACTTTGAAAAACAAGGTTCTTCGTC
AGCCTCTGAATTACATTATTGTGAACCTAGCAGTTGTCGATCTTCTAAGTGGTTTCGTTG
GCGGGTTTATTAGCATTGCTGCTAACGGTGCGGGATATTTTTTCTGGGGGAAGACAATGT
GCCAGATTGAAGGATATTTTGTTTCAAATTTTGGTGTGACTGGTTTGCTCTCAATTGCTG
TAATGGCATTTGAAAGATATTTCGTAATTTGCAAACCATTTGGGCCCGTTCGCTTTGAGG
AGAAACATTCAATTTTTGGCATCGTTATAACATGGGTCTGGTCGATGTTTTGGAACACAC
CACCTCTTATTTTTTGGGATGGCTACGACACTGAGGGTTTGGGAACCAGTTGTGCACCAA
ACTGGTTTGTCAAAGAAAAACGGGAACGGCTGTTTATAATCTTATATTTTGTCTTTTGCT
TTGTTATCCCTCTGGCAGTTATTATGATATGTTACGGAAAGCTTATTCTCACTCTAAGAC
AGATCGCCAAGGAAAGTTCCCTGAGTGGAGGAACAAGTCCCGAAGGTGAAGTCACCAAGA
TGGTGGTTGTTATGGTTACTGCATTTGTATTTTGCTGGTTGCCGTATGCCGCATTTGCCA
TGTACAACGTTGTCAATCCCGAAGCTCAGATCGATTACGCGCTTGGTGCTGCACCTGCTT
TTTTTGCAAAGACCGCGACGATTTATAATCCGCTTATCTACATAGGGTTGAACCGACAGT
TTCGAGATTGCGTAGTGCGAATGATCTTTAATGGTCGCAATCCCTGGGTTGATGAATTGG
TTGGCAGTCAAGTCAGTTCAACTGGTTCTCAGTTAACTGCAGTGAGCAGCAACAAAGTTG
CACCTGCGTAATATACATGTTAGTAAATATCTTTCCGTTGTACCCAGAGTATGTTTTGTA
AACATGATATTGTGGGGATGTAAGTTTTTTAATCTAGTACGTACCACCGGTCAATAAATA
GTCCCGGCTTTAGCCGATAAGCAATTTTGCCATATCTGCAAAAATGACAGCACAAGAGGA
TTTATACTTATATGCGAAAATAATCCCTGTTTTGTTCGGTAAATTTTGAGCATCACTCTA
AAAATAAAAGTGATTATCAATTGCTAATAGTAACTATCGATCTTTTTTTTTAATTCGTGC
ATAAATAT
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[89-113] 1.2E-35 - T[122-143] 1.2E-35 - T[167-189] 1.2E-35 - T[202-223] 1.2E-35 - T[252-275] 1.2E-35 - T[297-321] 1.2E-35 - T[335-361] 1.2E-35 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[104-353] 37.022 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[105-353] 3.2E-44 |
| ProSitePatterns |
GPCR_Rhodpsn (IPR000276) - T[173-189] . |
| ProSitePatterns |
Retinal_BS (IPR027430) - T[337-353] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OPSR_HUMAN | 45.161 % | 261 | 1.47E-84 |
| OPSG3_HUMAN | 45.161 % | 255 | 4.42E-82 |
| OPSG_HUMAN | 45.161 % | 255 | 4.42E-82 |