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- Transcript 'KH2012:KH.L171.13.v4...'
Transcript Model
Transcript Id
KH2012:KH.L171.13.v4.A.SL2-1
Possible name(s)
OPN1LW; OPN1MW2; OPN1MW3
Gene model
Location
KhL171 [206,541 / 208,520]
Amino acid sequence
Length: 367
>KH.L171.13.v4.A.SL2-1
LLKPDSLGMDHDVTPTVDLTDGVPQCKDLNPYVLKGDGWVPQHISRANRSTYSFLCVYMT
FVFLLSCSLNILVIVATLKNKVLRQPLNYIIVNLAVVDLLSGFVGGFISIAANGAGYFFW
GKTMCQIEGYFVSNFGVTGLLSIAVMAFERYFVICKPFGPVRFEEKHSIFGIVITWVWSM
FWNTPPLIFWDGYDTEGLGTSCAPNWFVKEKRERLFIILYFVFCFVIPLAVIMICYGKLI
LTLRQIAKESSLSGGTSPEGEVTKMVVVMVTAFVFCWLPYAAFAMYNVVNPEAQIDYALG
AAPAFFAKTATIYNPLIYIGLNRQFRDCVVRMIFNGRNPWVDELVGSQVSSTGSQLTAVS
SNKVAPA
Nucleotide sequence
Length: 1,403
>KH2012:KH.L171.13.v4.A.SL2-1
GTTTGTTAAAACCGGATTCACTGGGTATGGATCATGACGTAACACCAACTGTTGACTTGA
CTGACGGAGTTCCACAATGTAAAGATCTTAACCCTTACGTACTAAAAGGAGATGGTTGGG
TGCCTCAACATATAAGTCGGGCCAATCGTTCAACGTATAGTTTCCTTTGTGTTTACATGA
CATTTGTCTTTCTGCTGTCTTGTTCTCTCAACATCCTTGTTATAGTGGCCACTTTGAAAA
ACAAGGTTCTTCGTCAGCCTCTGAATTACATTATTGTGAACCTAGCAGTTGTCGATCTTC
TAAGTGGTTTCGTTGGCGGGTTTATTAGCATTGCTGCTAACGGTGCGGGATATTTTTTCT
GGGGGAAGACAATGTGCCAGATTGAAGGATATTTTGTTTCAAATTTTGGTGTGACTGGTT
TGCTCTCAATTGCTGTAATGGCATTTGAAAGATATTTCGTAATTTGCAAACCATTTGGGC
CCGTTCGCTTTGAGGAGAAACATTCAATTTTTGGCATCGTTATAACATGGGTCTGGTCGA
TGTTTTGGAACACACCACCTCTTATTTTTTGGGATGGCTACGACACTGAGGGTTTGGGAA
CCAGTTGTGCACCAAACTGGTTTGTCAAAGAAAAACGGGAACGGCTGTTTATAATCTTAT
ATTTTGTCTTTTGCTTTGTTATCCCTCTGGCAGTTATTATGATATGTTACGGAAAGCTTA
TTCTCACTCTAAGACAGATCGCCAAGGAAAGTTCCCTGAGTGGAGGAACAAGTCCCGAAG
GTGAAGTCACCAAGATGGTGGTTGTTATGGTTACTGCATTTGTATTTTGCTGGTTGCCGT
ATGCCGCATTTGCCATGTACAACGTTGTCAATCCCGAAGCTCAGATCGATTACGCGCTTG
GTGCTGCACCTGCTTTTTTTGCAAAGACCGCGACGATTTATAATCCGCTTATCTACATAG
GGTTGAACCGACAGTTTCGAGATTGCGTAGTGCGAATGATCTTTAATGGTCGCAATCCCT
GGGTTGATGAATTGGTTGGCAGTCAAGTCAGTTCAACTGGTTCTCAGTTAACTGCAGTGA
GCAGCAACAAAGTTGCACCTGCGTAATATACATGTTAGTAAATATCTTTCCGTTGTACCC
AGAGTATGTTTTGTAAACATGATATTGTGGGGATGTAAGTTTTTTAATCTAGTACGTACC
ACCGGTCAATAAATAGTCCCGGCTTTAGCCGATAAGCAATTTTGCCATATCTGCAAAAAT
GACAGCACAAGAGGATTTATACTTATATGCGAAAATAATCCCTGTTTTGTTCGGTAAATT
TTGAGCATCACTCTAAAAATAAAAGTGATTATCAATTGCTAATAGTAACTATCGATCTTT
TTTTTTAATTCGTGCATAAATAT
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[54-78] 7.1E-36 - T[87-108] 7.1E-36 - T[132-154] 7.1E-36 - T[167-188] 7.1E-36 - T[217-240] 7.1E-36 - T[262-286] 7.1E-36 - T[300-326] 7.1E-36 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[69-318] 37.022 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[70-318] 2.5E-44 |
| ProSitePatterns |
GPCR_Rhodpsn (IPR000276) - T[138-154] . |
| ProSitePatterns |
Retinal_BS (IPR027430) - T[302-318] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OPSR_HUMAN | 45.161 % | 261 | 8.9E-85 |
| OPSG3_HUMAN | 45.161 % | 254 | 2.88E-82 |
| OPSG_HUMAN | 45.161 % | 254 | 2.88E-82 |