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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C6.283.v1....' > 
  2. Transcript 'KH2012:KH.C7.646.v1....' > 
  3. Transcript 'KH2012:KH.L172.26.v1...' > 
  4. Transcript 'KH2012:KH.C11.339.v1...' > 
  5. Transcript 'KH2012:KH.L172.26.v1...'

Transcript Model

Transcript Id

KH2012:KH.L172.26.v1.A.nonSL2-1

Possible name(s)

NAA38; SNRPB; SNRPN

Gene model

KH2012:KH.L172.26

Location

KhL172 [53,045 / 54,367]

Sequences

Amino acid sequence

Length: 172

>KH.L172.26.v1.A.nonSL2-1
LLIIFQPPRGGSKLNNHINYRMRCILQDGRVFIGTFKAFDKHMNLILVDCDEFRRVRPKK
GATDREEKRTLGLVLLRGEHLVSMSVEGPPPSGKGMGVPGGITRGPGQGRAAGRGMGGPG
GPAPGLHGPMHGVGGPPPGSMAPQRGGFGPPPGMRGPPPGMGRGGFGRGFGY

Nucleotide sequence

Length: 740

>KH2012:KH.L172.26.v1.A.nonSL2-1
ACGTCATTGTTACGTATTTCTACCAGTTTATTAATATTACGTCATCATGGTAAGTTTAAG
TTAAATAATTAGTTACTTAATATTAATTATTAATTATATTTCAGCCTCCAAGGGGTGGGT
CAAAGTTGAACAATCACATCAACTATCGCATGCGATGTATTTTACAGGATGGCCGTGTTT
TTATCGGAACGTTTAAAGCGTTCGACAAACATATGAATCTGATCCTTGTCGACTGCGATG
AGTTCCGTCGCGTACGACCAAAGAAAGGAGCGACAGACCGTGAAGAGAAACGGACACTAG
GTCTCGTACTTTTACGAGGAGAACATCTCGTTTCGATGTCAGTTGAAGGTCCCCCGCCGT
CCGGGAAAGGAATGGGTGTTCCTGGCGGTATCACTAGAGGGCCTGGCCAAGGTCGAGCGG
CTGGGAGGGGCATGGGGGGCCCGGGGGGTCCAGCCCCTGGGTTGCATGGTCCCATGCATG
GTGTCGGGGGTCCACCGCCGGGGTCAATGGCCCCACAACGTGGTGGGTTCGGCCCTCCCC
CAGGTATGAGGGGCCCACCCCCAGGTATGGGAAGGGGGGGCTTTGGTCGAGGGTTCGGAT
ACTAAGGGTCACATGCCCCCCGTCGAGCTGCGAGCAGGAGGTCTGTTAACCAGGCCTCGA
ATTCCTTTTTTCAGCGGAATTTTTCGGCGAAAATTTGTCTGACTTTTTTTATCGTGAGTA
AAATAAAATTGAAATGAAAA

InterProScan

SMART
LSM_dom_euk/arc (IPR001163) - T[12-86] 4.0E-24
SUPERFAMILY
LSM_dom_sf (IPR010920) - T[12-132] 8.31E-24
Pfam
LSM_dom_euk/arc (IPR001163) - T[13-85] 2.0E-20

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RSMN_HUMAN 61.702 % 150 5.17E-46
RSMB_HUMAN 61.702 % 151 2.7E-46