- Transcript 'Moocci.CG.ELv1_2.S47...' >
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- Transcript 'Phfumi.CG.MTP2014.S1...' >
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- Transcript 'KH2012:KH.L173.5.v2....'
Transcript Model
Transcript Id
KH2012:KH.L173.5.v2.A.nonSL11-1
Possible name(s)
CTCF; CTCFL; ZNF501
Gene model
Location
KhL173 [45,060 / 51,480]
Amino acid sequence
Length: 506
>KH.L173.5.v2.A.nonSL11-1
VVRILVEMADDGKDSVEVTSQIESVNGTVAPPNDSIEPEENEVSEKNEEKIIEEVSNEAP
AEAPVEDGTTTTVQFIAVSADEHARMVTAGELPESVHGADVHMQIPGAEAQQVRLIAVDS
NGVPVTESAILQAAAEQAGIVFITKDDNGHDSQITIDQAMQLSMRENPPMITATTAAVVL
EQKEKEVHQDTDGNDTEDESETKKPSVRKPRLKLRVYSQKDGGVDEVATSFLDDGSLALT
DEVETLEEKPNDESVYEFQDPPTGGDTEQPSDVTMLDPTMFKKNSKRATDKSRDRRKIYQ
CRECSFYSHRHSNLVRHMKIHTDERPYKCHLCERSFRTNTLLRNHINTHTGVKPYKCTVD
GCVMAFVTSGELTRHTRYIHTHEKPFRCTLCDYASVEISKLRRHFRSHTGERPYSCEECG
KAFADSFHLKRHRMSHTGEKPYECPECNQRFTQRGSVKMHIMQQHTKTAPKFKCEICRTL
LGRKSDLNVHMRKQHAFQVIMMSLCW
Nucleotide sequence
Length: 1,600
>KH2012:KH.L173.5.v2.A.nonSL11-1
ATTCAGTTATTTGTTCTTTTAGTGAACCCAGCTATTGTAACGACATTGTCGCACTTATAC
GGCAAGTTTTACTTTGTAAGTTGTTCGTATTTTAGTTGAGATGGCAGATGATGGAAAAGA
TAGCGTTGAAGTAACTTCACAAATTGAGTCGGTTAACGGCACTGTAGCGCCACCCAATGA
CTCGATTGAGCCCGAGGAAAATGAAGTGTCGGAAAAAAATGAAGAAAAAATTATTGAAGA
AGTTTCGAATGAGGCTCCTGCCGAGGCCCCTGTGGAAGATGGGACAACGACAACCGTTCA
ATTCATCGCTGTATCAGCTGATGAACATGCTCGTATGGTCACCGCTGGCGAGTTACCGGA
GAGCGTGCATGGGGCCGACGTACATATGCAGATACCAGGCGCTGAAGCACAACAAGTTCG
ATTAATCGCAGTAGACAGCAACGGTGTTCCCGTCACCGAGTCAGCGATACTGCAAGCAGC
TGCGGAACAAGCGGGCATTGTTTTCATAACAAAGGACGACAATGGACATGATTCGCAGAT
AACTATTGACCAAGCCATGCAGTTGTCCATGAGGGAGAACCCCCCCATGATAACGGCGAC
CACTGCAGCCGTCGTGCTCGAACAAAAAGAGAAAGAAGTTCACCAGGATACCGATGGCAA
CGATACAGAAGACGAAAGCGAGACAAAGAAACCATCGGTACGGAAACCACGATTGAAACT
TCGCGTGTACAGTCAGAAGGACGGTGGAGTTGACGAGGTGGCAACGTCGTTCCTCGATGA
CGGGAGCCTCGCTCTCACTGATGAAGTTGAAACTTTGGAAGAAAAACCAAACGATGAATC
AGTTTACGAGTTCCAGGATCCACCAACGGGTGGCGACACAGAGCAACCCAGTGATGTCAC
AATGCTTGACCCAACCATGTTTAAAAAGAATTCGAAGCGAGCTACGGATAAAAGTCGCGA
CCGTCGTAAGATTTATCAGTGTCGGGAATGTTCGTTCTACAGCCATCGTCATAGTAACTT
GGTTCGGCACATGAAGATCCACACCGATGAGCGACCTTATAAATGCCATCTTTGCGAACG
ATCGTTTCGTACGAACACATTACTTCGTAACCACATCAACACACATACAGGAGTGAAGCC
GTACAAATGTACAGTTGATGGTTGTGTTATGGCATTCGTAACCAGTGGTGAGCTAACCCG
ACACACAAGGTACATTCACACCCACGAGAAACCTTTCCGATGCACGTTGTGCGATTATGC
GAGCGTCGAAATCAGCAAACTACGCCGACATTTCCGTTCCCACACTGGGGAGCGACCTTA
TTCTTGCGAGGAGTGTGGCAAAGCGTTTGCTGATAGTTTTCATTTGAAACGACATCGAAT
GTCGCACACCGGTGAGAAACCTTACGAGTGTCCGGAATGTAACCAGCGTTTTACCCAGCG
TGGTAGTGTGAAGATGCATATCATGCAGCAACACACGAAGACGGCTCCGAAGTTTAAATG
CGAGATTTGTCGAACTTTGTTGGGAAGGAAAAGCGATTTAAATGTCCATATGCGGAAGCA
ACACGCTTTCCAGGTGATTATGATGTCACTATGTTGGTGA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[297-349] 2.09E-13 - T[335-392] 8.08E-17 - T[399-451] 1.1E-20 - T[470-497] 2.59E-11 |
| SMART |
Znf_C2H2_type (IPR013087) - T[299-321] 0.032 - T[327-349] 0.0054 - T[355-380] 0.0038 - T[386-408] 0.039 - T[414-436] 9.9E-4 - T[442-465] 6.3E-4 - T[472-495] 0.022 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[299-326] 13.36 - T[327-354] 14.336 - T[355-385] 13.63 - T[386-413] 13.38 - T[414-441] 17.308 - T[442-470] 12.175 - T[472-496] 8.954 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[329-349] . - T[357-380] . - T[416-436] . - T[444-465] . - T[474-495] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CTCF_HUMAN | 64.322 % | 285 | 5.2E-88 |
| CTCFL_HUMAN | 52.227 % | 275 | 4.45E-85 |
| ZN501_HUMAN | 40.708 % | 162 | 3.02E-46 |