- Transcript 'KH2012:KH.L173.5.v3....'
Transcript Model
Transcript Id
KH2012:KH.L173.5.v3.A.nonSL3-1
Possible name(s)
CTCF; CTCFL; ZNF501
Gene model
Location
KhL173 [44,975 / 51,480]
Amino acid sequence
Length: 523
>KH.L173.5.v3.A.nonSL3-1
KSKNLFQTGKNLAKSSYLLSFELEMADDGKDSVEVTSQIESVNGTVAPPNDSIEPEENEV
SEKNEEKIIEEVSNEAPAEAPVEDGTTTTVQFIAVSADEHARMVTAGELPESVHGADVHM
QIPGAEAQQVRLIAVDSNGVPVTESAILQAAAEQAGIVFITKDDNGHDSQITIDQAMQLS
MRENPPMITATTAAVVLEQKEKEVHQDTDGNDTEDESETKKPSVRKPRLKLRVYSQKDGG
VDEVATSFLDDGSLALTDEVETLEEKPNDESVYEFQDPPTGGDTEQPSDVTMLDPTMFKK
NSKRATDKSRDRRKIYQCRECSFYSHRHSNLVRHMKIHTDERPYKCHLCERSFRTNTLLR
NHINTHTGVKPYKCTVDGCVMAFVTSGELTRHTRYIHTHEKPFRCTLCDYASVEISKLRR
HFRSHTGERPYSCEECGKAFADSFHLKRHRMSHTGEKPYECPECNQRFTQRGSVKMHIMQ
QHTKTAPKFKCEICRTLLGRKSDLNVHMRKQHAFQVIMMSLCW
Nucleotide sequence
Length: 1,572
>KH2012:KH.L173.5.v3.A.nonSL3-1
AAATCGAAGAATTTATTTCAAACCGGGAAGAATTTGGCCAAAAGTTCATATTTATTGTCT
TTTGAACTTGAGATGGCAGATGATGGAAAAGATAGCGTTGAAGTAACTTCACAAATTGAG
TCGGTTAACGGCACTGTAGCGCCACCCAATGACTCGATTGAGCCCGAGGAAAATGAAGTG
TCGGAAAAAAATGAAGAAAAAATTATTGAAGAAGTTTCGAATGAGGCTCCTGCCGAGGCC
CCTGTGGAAGATGGGACAACGACAACCGTTCAATTCATCGCTGTATCAGCTGATGAACAT
GCTCGTATGGTCACCGCTGGCGAGTTACCGGAGAGCGTGCATGGGGCCGACGTACATATG
CAGATACCAGGCGCTGAAGCACAACAAGTTCGATTAATCGCAGTAGACAGCAACGGTGTT
CCCGTCACCGAGTCAGCGATACTGCAAGCAGCTGCGGAACAAGCGGGCATTGTTTTCATA
ACAAAGGACGACAATGGACATGATTCGCAGATAACTATTGACCAAGCCATGCAGTTGTCC
ATGAGGGAGAACCCCCCCATGATAACGGCGACCACTGCAGCCGTCGTGCTCGAACAAAAA
GAGAAAGAAGTTCACCAGGATACCGATGGCAACGATACAGAAGACGAAAGCGAGACAAAG
AAACCATCGGTACGGAAACCACGATTGAAACTTCGCGTGTACAGTCAGAAGGACGGTGGA
GTTGACGAGGTGGCAACGTCGTTCCTCGATGACGGGAGCCTCGCTCTCACTGATGAAGTT
GAAACTTTGGAAGAAAAACCAAACGATGAATCAGTTTACGAGTTCCAGGATCCACCAACG
GGTGGCGACACAGAGCAACCCAGTGATGTCACAATGCTTGACCCAACCATGTTTAAAAAG
AATTCGAAGCGAGCTACGGATAAAAGTCGCGACCGTCGTAAGATTTATCAGTGTCGGGAA
TGTTCGTTCTACAGCCATCGTCATAGTAACTTGGTTCGGCACATGAAGATCCACACCGAT
GAGCGACCTTATAAATGCCATCTTTGCGAACGATCGTTTCGTACGAACACATTACTTCGT
AACCACATCAACACACATACAGGAGTGAAGCCGTACAAATGTACAGTTGATGGTTGTGTT
ATGGCATTCGTAACCAGTGGTGAGCTAACCCGACACACAAGGTACATTCACACCCACGAG
AAACCTTTCCGATGCACGTTGTGCGATTATGCGAGCGTCGAAATCAGCAAACTACGCCGA
CATTTCCGTTCCCACACTGGGGAGCGACCTTATTCTTGCGAGGAGTGTGGCAAAGCGTTT
GCTGATAGTTTTCATTTGAAACGACATCGAATGTCGCACACCGGTGAGAAACCTTACGAG
TGTCCGGAATGTAACCAGCGTTTTACCCAGCGTGGTAGTGTGAAGATGCATATCATGCAG
CAACACACGAAGACGGCTCCGAAGTTTAAATGCGAGATTTGTCGAACTTTGTTGGGAAGG
AAAAGCGATTTAAATGTCCATATGCGGAAGCAACACGCTTTCCAGGTGATTATGATGTCA
CTATGTTGGTGA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[314-366] 2.24E-13 - T[352-409] 8.5E-17 - T[416-468] 1.18E-20 - T[487-514] 2.86E-11 |
| SMART |
Znf_C2H2_type (IPR013087) - T[316-338] 0.032 - T[344-366] 0.0054 - T[372-397] 0.0038 - T[403-425] 0.039 - T[431-453] 9.9E-4 - T[459-482] 6.3E-4 - T[489-512] 0.022 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[316-343] 13.36 - T[344-371] 14.336 - T[372-402] 13.63 - T[403-430] 13.38 - T[431-458] 17.308 - T[459-487] 12.175 - T[489-513] 8.954 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[346-366] . - T[374-397] . - T[433-453] . - T[461-482] . - T[491-512] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CTCF_HUMAN | 64.322 % | 285 | 6.7E-88 |
| CTCFL_HUMAN | 52.227 % | 276 | 5.11E-85 |
| ZN501_HUMAN | 40.708 % | 162 | 4.61E-46 |