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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L3.8.v3.C....'
  2. Transcript 'Moocul.CG.ELv1_2.S77...'
  3. Transcript 'Phmamm.CG.MTP2014.S2...'
  4. Transcript 'KH2012:KH.C1.20.v1.A...'
  5. Transcript 'KH2012:KH.L17.6.v3.A...'

Transcript Model

Transcript Id

KH2012:KH.L17.6.v3.A.ND2-1

Possible name(s)

SAFB; SAFB2; SLTM

Location

KhL17 [31,994 / 37,756]

Sequences

Amino acid sequence

Length: 733

>KH.L17.6.v3.A.ND2-1
RCKNEDTGCKNLWVSGLSATTRASELKVAFSRYGKVVGAKVVTNAKSPGSKCFGFVAMAS
VAAADKCILHLNKTELHGRTITVERTMSDPSTSRKPDRKPTSTSDKTNKDLNKADKMKES
TSDKKYSTNEKSRSLNDGANKEDKSSARRRSQSDIGKSRGNDRQNRAGDKRHNASEPKPT
NREEPYRKRVRQQDNAGRKVVMDTNKGEMSLRVNVSASSGRKPNMVKRVSKPVNHDKKQP
IRKPEVLTLEQIRAQRRDAPRRRVGEGRNQSLAASASGVERERAMLRREREEREFLRLER
EKLERERRQLERDRLEREKLEQERIRLEQERKRELERIEREKEEMRRLQEMNRYEQTQRQ
RLKRSYDERGRSPANNGYHKREGVGGEREGRRGDRDDRKGNYSEYERSSQSQSQSSYRNI
QRGSAARISRVTKTDYHDVDRRRDNEMMHDTDARYEARRVEKYRGVGVKTNNTGRGYEAT
NDRRIDVSRESVRDTSRDTSRDHIRESVRETPRDHGRDITRETTRETNHARDISREAARR
HVEEVGRKVVPRERLSDDQRYRRSSATSETWRDTNTRGPATDRDLREEIRGRQATDYTEP
SRRKLPERTSHDRRSGSRSVADHGEYQRSTSHGVSHKKQTTPEVSGKPIPTQTSRVGGTH
SGWTWQDSQRNVTNSMWAGSAVPTLATAQFGLATPQAPLPNPMLGHGINAAYISSEQHGA
VERFPTYKSIRRY

Nucleotide sequence

Length: 2,325

>KH2012:KH.L17.6.v3.A.ND2-1
GTAAAAGTTGAAGTCGATACAAAAGTTGTTGAACCTCCAGTTTGCCCGGCAAAGGATTCT
TCGATAAAAACTGAAGGTGTAAGAACGAGGATACTGGATGTAAAAACTTGTGGGTGAGTG
GGTTGTCGGCCACTACCCGCGCTAGTGAGCTCAAAGTCGCCTTCAGCCGATACGGGAAGG
TTGTTGGAGCCAAAGTCGTCACTAACGCTAAAAGTCCGGGTTCGAAATGTTTTGGTTTTG
TAGCGATGGCAAGCGTTGCTGCTGCTGATAAATGTATTTTGCATCTTAATAAAACGGAGC
TTCACGGGAGAACCATTACAGTGGAGAGGACGATGAGCGATCCATCAACATCACGCAAAC
CCGATCGTAAACCAACATCAACTTCCGATAAAACAAACAAGGACTTGAATAAAGCGGACA
AGATGAAAGAGAGTACATCCGACAAGAAATATTCAACGAATGAAAAGTCTAGAAGTTTAA
ATGACGGAGCAAATAAAGAAGACAAATCATCTGCACGCCGACGATCACAAAGTGACATTG
GGAAAAGCCGAGGAAACGATCGTCAAAACAGGGCTGGGGATAAGCGACACAACGCAAGCG
AGCCAAAGCCAACAAACCGTGAAGAACCTTACAGGAAACGAGTGCGACAACAAGATAATG
CTGGTCGAAAGGTCGTCATGGATACGAACAAAGGGGAAATGAGTTTACGGGTCAACGTTA
GCGCCTCCAGTGGTCGCAAGCCCAACATGGTAAAGCGAGTCTCGAAACCAGTGAACCATG
ACAAGAAACAACCAATCAGGAAGCCGGAAGTTCTCACTCTGGAGCAAATCCGTGCTCAGA
GGAGGGATGCTCCTAGGAGGAGAGTGGGAGAAGGGAGGAACCAATCACTGGCTGCGAGTG
CCTCAGGAGTGGAGAGGGAGAGAGCAATGTTAAGAAGAGAAAGAGAAGAAAGGGAGTTTC
TCCGGTTAGAGAGGGAGAAGCTGGAGAGAGAGAGGAGACAGTTGGAGAGGGATCGGTTGG
AACGAGAGAAGTTGGAACAAGAACGCATACGGTTGGAACAAGAACGGAAACGAGAATTGG
AGCGGATCGAACGTGAGAAAGAAGAAATGAGAAGATTACAGGAAATGAATCGGTACGAAC
AGACACAACGCCAACGACTTAAACGTTCGTACGACGAGCGTGGAAGGTCTCCTGCTAATA
ATGGATATCATAAGCGGGAGGGGGTTGGTGGTGAAAGGGAGGGAAGGAGGGGTGATCGAG
ATGATAGGAAGGGGAATTACAGCGAATATGAACGTTCCTCTCAATCGCAATCACAGAGCT
CGTATCGAAATATACAGCGAGGATCAGCCGCTCGAATATCACGAGTCACGAAGACAGATT
ATCACGATGTTGATCGTCGCCGTGACAACGAGATGATGCACGACACCGACGCTCGATACG
AGGCACGTCGAGTGGAGAAATATCGGGGGGTTGGGGTCAAAACGAACAATACTGGTCGGG
GCTATGAAGCCACGAACGATCGTCGCATTGATGTTTCACGTGAGTCGGTTCGTGATACAT
CTCGTGATACTTCCCGTGATCATATTCGTGAATCTGTTCGTGAGACTCCTCGAGATCATG
GTCGTGATATAACTCGAGAAACAACTCGTGAAACAAACCACGCACGTGATATATCTCGTG
AAGCAGCAAGACGTCATGTAGAGGAGGTTGGTCGTAAAGTTGTTCCACGCGAGCGATTAT
CGGACGATCAGCGATATCGTCGTTCATCTGCGACCAGTGAAACATGGAGGGATACGAACA
CTAGAGGGCCAGCCACCGATCGTGATTTGAGGGAAGAGATTCGAGGAAGACAGGCAACGG
ATTACACGGAACCTTCACGTCGTAAACTACCTGAACGTACGTCACATGATCGGAGAAGTG
GTTCACGCTCCGTTGCAGATCACGGAGAATATCAACGTAGCACAAGTCATGGTGTGTCGC
ATAAAAAACAAACGACACCAGAGGTCAGTGGTAAGCCGATCCCGACGCAAACGAGTCGCG
TTGGTGGCACGCATAGTGGTTGGACGTGGCAGGATAGCCAGCGTAATGTTACAAACTCTA
TGTGGGCAGGGAGTGCCGTACCTACGTTGGCTACAGCACAGTTTGGTCTCGCCACACCAC
AAGCCCCGTTACCCAACCCAATGCTTGGCCATGGCATCAATGCTGCTTATATCTCATCGG
AACAACATGGAGCTGTTGAAAGATTTCCAACTTACAAATCAATCAGAAGATATTAAACAC
TACTGCCTTTGTAATAAATGTAAATAAACGACGCTGAAATATTCA

InterProScan

Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[2-99] 6.1E-21
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[6-98] 1.9E-21
ProSiteProfiles
RRM_dom (IPR000504) - T[10-88] 13.993
SMART
RRM_dom (IPR000504) - T[11-84] 1.3E-19
Pfam
RRM_dom (IPR000504) - T[12-81] 1.1E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SAFB1_HUMAN 52.5 % 128 2.03E-30
SAFB2_HUMAN 36.915 % 131 1.59E-31
SLTM_HUMAN 58.537 % 119 1.17E-27