Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L18.107.v1.A.nonSL4-1

Possible name(s)

SSR4

Gene model

KH2012:KH.L18.107

Location

KhL18 [52,281 / 53,999]

Sequences

Amino acid sequence

Length: 173

>KH.L18.107.v1.A.nonSL4-1
IKGKSIMANLLVISVLSLLIGSGFCCDQPSVDSSYYTSTNLKLGKNAAFVVELTVKCKNN
VQDLMLYADVNGVQYPVTKSPEGNNYQVSWTAKNKKSPAALFDVKFFDESGYNALKKAAR
INQDANTVKPLFSVDVKHHGMSSGFWVSSELIALAVASLIFYVVCNERSAVIS

Nucleotide sequence

Length: 690

>KH2012:KH.L18.107.v1.A.nonSL4-1
AGGTACTTTATAATAAATTAAGGGCAAATCAATCATGGCAAACTTGCTCGTTATTTCTGT
ATTGTCCTTATTAATCGGATCAGGGTTTTGTTGCGACCAACCATCAGTTGACTCGTCTTA
CTACACAAGCACAAACTTAAAATTGGGGAAAAATGCTGCATTCGTTGTTGAACTGACAGT
CAAGTGCAAGAACAATGTTCAGGACTTGATGTTGTATGCTGATGTGAATGGTGTACAATA
CCCAGTTACTAAATCACCTGAAGGAAACAACTACCAAGTGAGCTGGACAGCAAAGAATAA
GAAGTCGCCGGCTGCACTTTTTGATGTCAAGTTCTTTGATGAATCAGGTTACAATGCTCT
AAAGAAAGCTGCCCGAATTAACCAAGATGCTAACACTGTAAAACCACTTTTCTCAGTTGA
CGTGAAACACCATGGTATGAGTTCTGGGTTCTGGGTCAGTTCTGAATTGATTGCTCTTGC
TGTTGCCAGTCTCATATTTTACGTTGTGTGCAATGAACGAAGTGCAGTTATTTCCTAAAG
CAATTTTTCATAATTTTGTACAAATGAAGCAGTGGTAGTTTAATTGTGGACTTACGAGAT
TTTTTTACGTGTACATTACACTGCAGTTTTGGAATTACACTTTCGTTATAACTCGAAACC
GTAAAATTAAAAATACACCACGAGATTGTA

InterProScan

PANTHER	TRAP-delta (IPR008855) - T[7-171] 2.2E-64
Pfam	TRAP-delta (IPR008855) - T[12-171] 1.1E-60

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SSRD_HUMAN	40.816 %	142	1.79E-43