- Transcript 'KH2012:KH.C1.144.v3....' >
- Transcript 'KH2012:KH.C8.74.v2.A...' >
- Transcript 'KH2012:KH.C3.139.v1....' >
- Transcript 'KH2012:KH.C1.144.v2....' >
- Transcript 'KH2012:KH.L18.14.v1....'
Transcript Model
Transcript Id
KH2012:KH.L18.14.v1.A.SL1-1
Possible name(s)
CNBP; ZCCHC13; ZCCHC9
Gene model
Location
KhL18 [81,432 / 85,976]
Amino acid sequence
Length: 318
>KH.L18.14.v1.A.SL1-1
TNCKKGITMPGRMNNSRETYSSREIYNPRESYSSRETYTPRETYDYQSRKPSNDNCFICD
KSGHWARECPESDEQQREYAPRTRGGFRGRGRGRGRGRGSYGGYGGYGGYGTRQRDADVC
YKCGTPGHFARECPNDAADGIQRNEDRRPMGRRNNDYCFRCGQPGHMARDCLSAENGRSR
TGATNINTCYNCYKEGHLARDCPEDNACYKCGKAGHLARKCPEDADRNGDARLNRREAGT
KQCYLCQNVGHIQANCPEATCYRCHGEGHIARDCPNGNEECYNCRRPGHKARDCDEPRPG
ELSNEDDGNEEEKELNDA
Nucleotide sequence
Length: 1,753
>KH2012:KH.L18.14.v1.A.SL1-1
AATTTTCTAATAAACAAACTGCAAAAAAGGTATAACAATGCCTGGTCGTATGAATAACTC
AAGGGAAACTTACAGCTCAAGGGAAATATATAACCCGAGGGAATCCTACAGCTCAAGGGA
AACTTATACCCCAAGAGAAACTTATGACTACCAGAGTCGCAAGCCTTCCAATGACAACTG
CTTCATCTGTGACAAGTCAGGTCACTGGGCTCGTGAATGTCCCGAATCGGATGAGCAGCA
GAGAGAATATGCTCCGAGGACCCGTGGAGGATTCCGGGGAAGAGGGAGAGGACGGGGCAG
GGGTCGTGGAAGTTATGGGGGTTACGGGGGTTATGGAGGTTATGGAACACGACAGCGTGA
TGCTGATGTTTGCTACAAATGTGGAACCCCTGGTCACTTTGCAAGAGAATGCCCAAATGA
CGCAGCTGATGGAATACAAAGAAATGAAGACAGAAGGCCAATGGGTCGTCGCAACAACGA
TTACTGCTTTCGCTGTGGTCAACCTGGCCACATGGCCCGTGACTGCTTGTCTGCTGAGAA
TGGTAGGTCAAGAACAGGGGCAACGAATATTAACACATGCTACAATTGCTACAAAGAAGG
CCATCTTGCACGTGACTGTCCAGAGGACAATGCGTGCTACAAATGCGGTAAAGCGGGTCA
TCTTGCACGCAAGTGTCCCGAAGATGCAGACAGAAATGGTGATGCACGCTTAAACCGTAG
AGAGGCAGGAACAAAGCAATGCTACCTTTGTCAAAATGTCGGACATATCCAGGCAAATTG
CCCAGAGGCTACTTGCTATCGTTGCCACGGTGAAGGCCATATTGCACGTGATTGCCCGAA
CGGCAATGAAGAATGTTACAACTGTCGAAGACCTGGTCACAAGGCTCGTGACTGTGACGA
GCCACGTCCTGGAGAACTAAGCAACGAGGATGATGGAAATGAGGAAGAGAAGGAGCTGAA
TGATGCTTAGGTGTCACTCGCACCTGCAACTCCGGACATCCCTAAAATTAACGTAATTTT
TGAGAAGTAGATACTTTTAAGTGAGCCTGACAACTACGCGTTTGTGAGTGTGGACTAATG
TCATCATTGTAGCTGTCATGGGAATCAAAGATGCAGCAAAACCTCTATGGTTCGGTGGAT
TGGATATAAAGAGTCGTCCAAGTTGTTTTTGGTGAACGTGGATCTGTTTTGCTGGACAAT
CTTATTGTTTACTTCGGTTAATTTTAAATTCTTCAATCATTTTTAGTCTATACAAATTAA
ATGACGACCCCTTTTACCCAAAATTGTACAAATTAAATTAAAATATGTGAAGTTGAAAAA
AGCAACTGTTTCTACTCCCAGACTACTTTTAGTTGACCTGAAATGATGTTTTAAATAATC
TAGGTTTGAATGTTTTATAATTATGTGCGGGTTCCATGCGTTTTACTTCCACATTAATTT
TCAACTATTTGTTAAACCCTAAATCCCTCATTTGTATAAAAATGCTGGTTCAGGCAACTA
AGAAATGGGGTTAGTTGCTGTGTGCTTTCTAAACGCCGCCGAAATAGAGCAAATGATAAT
GTCCTTGCATTGCATGATAAAAAATTTCCAAAACTTGTACCAAAAAGGGCATGTACTTAT
TTGATTCCATACCAAACCTGTTGTTTACAGTTCACGATTTGTATCTTTTTCTTAACATGT
TTACTATTTGTTAAAACTTTCGCACCCATCTCGGTTAAAAGTGTTTGGATACAATAAACC
AACTTGTGACAAA
| SUPERFAMILY |
Znf_CCHC_sf (IPR036875) - T[45-78] 1.57E-9 - T[113-173] 1.36E-10 - T[180-224] 6.58E-13 - T[234-258] 4.97E-5 - T[260-298] 1.14E-10 |
| SMART |
Znf_CCHC (IPR001878) - T[55-71] 2.2E-4 - T[119-135] 5.3E-6 - T[157-173] 4.4E-5 - T[188-204] 1.5E-5 - T[207-223] 2.4E-5 - T[242-258] 0.0066 - T[260-276] 1.4E-5 - T[280-296] 0.0022 |
| Pfam |
Znf_CCHC (IPR001878) - T[55-71] 6.8E-6 - T[119-135] 3.3E-8 - T[157-171] 7.2E-7 - T[187-204] 1.6E-6 - T[207-223] 1.8E-6 - T[242-258] 2.9E-4 - T[260-276] 1.7E-5 - T[280-296] 6.3E-6 |
| ProSiteProfiles |
Znf_CCHC (IPR001878) - T[56-71] 9.916 - T[120-135] 11.317 - T[158-171] 11.219 - T[189-204] 10.905 - T[208-223] 11.466 - T[243-258] 8.862 - T[261-276] 10.444 - T[281-296] 10.18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CNBP_HUMAN | 36.649 % | 108 | 1.18E-28 |