Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L18.18.v2.A.nonSL9-3

Possible name(s)

SSR3

Gene model

KH2012:KH.L18.18

Location

KhL18 [170,679 / 171,743]

Sequences

Amino acid sequence

Length: 168

>KH.L18.18.v2.A.nonSL9-3
VLGIIMAPKSSNFSKEEELLLQDFGRDLSRKSSVIFYVHALFVSAIPLWLFNRIHQMEML
DNAILFVIGTIFSAYFVALAYKNNKFELKHKIAQKRSDGVAAELNAKMSESESKKISKKE
KDERILWRKNEIAEAESMQLAVFYTNSLFLILLILSSFFFFKSYSPMP

Nucleotide sequence

Length: 740

>KH2012:KH.L18.18.v2.A.nonSL9-3
ATTGTGTTGTGTTATGTGTAAGCTGTTTAACCCCGATAACTGTGCATATAGACGTTGTTA
AGTGTTAGGGATAATCATGGCACCTAAATCATCGAACTTCAGCAAAGAGGAGGAACTTTT
GCTTCAAGATTTCGGAAGAGATCTATCGCGAAAATCTTCCGTGATCTTTTATGTTCATGC
GTTATTTGTCTCTGCTATTCCACTATGGCTATTCAATCGCATACATCAAATGGAGATGTT
GGACAATGCCATTCTCTTTGTAATTGGGACCATTTTCAGTGCCTACTTTGTCGCCCTAGC
TTACAAAAATAATAAGTTTGAGCTAAAGCACAAAATTGCTCAAAAGAGGAGTGATGGAGT
GGCAGCTGAACTTAATGCTAAGATGTCTGAATCAGAATCAAAGAAGATCTCAAAGAAAGA
GAAAGATGAAAGGATCTTGTGGCGTAAAAACGAAATAGCTGAAGCAGAATCCATGCAGCT
TGCAGTGTTCTACACCAACAGCCTTTTCTTGATTCTGCTCATTCTTTCATCTTTTTTCTT
CTTTAAGAGCTACAGCCCAATGCCGTAAGAAATAGTGGTCCCTTTAATTAGTGCATGTCC
GCTATAAGTCCACAATATTAACATTGTCCGCCATGTCCACTATGTAGTAAATATTGTAGA
CATAGCAGACATGCACTAGTTAAAGGGACCCAGAATTAGCTTTACTTTGGGTCGATAAAT
AATAACCACCGCTGTATTTT

InterProScan

PANTHER	SSR3 (IPR009779) - T[6-167] 1.6E-63
Pfam	SSR3 (IPR009779) - T[16-167] 3.0E-67

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SSRG_HUMAN	53.704 %	187	1.7E-61