Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L18.18.v2.A.SL2-3

Possible name(s)

SSR3

Gene model

KH2012:KH.L18.18

Location

KhL18 [170,679 / 171,692]

Sequences

Amino acid sequence

Length: 168

>KH.L18.18.v2.A.SL2-3
VLGIIMAPKSSNFSKEEELLLQDFGRDLSRKSSVIFYVHALFVSAIPLWLFNRIHQMEML
DNAILFVIGTIFSAYFVALAYKNNKFELKHKIAQKRSDGVAAELNAKMSESESKKISKKE
KDERILWRKNEIAEAESMQLAVFYTNSLFLILLILSSFFFFKSYSPMP

Nucleotide sequence

Length: 689

>KH2012:KH.L18.18.v2.A.SL2-3
ACGTTGTTAAGTGTTAGGGATAATCATGGCACCTAAATCATCGAACTTCAGCAAAGAGGA
GGAACTTTTGCTTCAAGATTTCGGAAGAGATCTATCGCGAAAATCTTCCGTGATCTTTTA
TGTTCATGCGTTATTTGTCTCTGCTATTCCACTATGGCTATTCAATCGCATACATCAAAT
GGAGATGTTGGACAATGCCATTCTCTTTGTAATTGGGACCATTTTCAGTGCCTACTTTGT
CGCCCTAGCTTACAAAAATAATAAGTTTGAGCTAAAGCACAAAATTGCTCAAAAGAGGAG
TGATGGAGTGGCAGCTGAACTTAATGCTAAGATGTCTGAATCAGAATCAAAGAAGATCTC
AAAGAAAGAGAAAGATGAAAGGATCTTGTGGCGTAAAAACGAAATAGCTGAAGCAGAATC
CATGCAGCTTGCAGTGTTCTACACCAACAGCCTTTTCTTGATTCTGCTCATTCTTTCATC
TTTTTTCTTCTTTAAGAGCTACAGCCCAATGCCGTAAGAAATAGTGGTCCCTTTAATTAG
TGCATGTCCGCTATAAGTCCACAATATTAACATTGTCCGCCATGTCCACTATGTAGTAAA
TATTGTAGACATAGCAGACATGCACTAGTTAAAGGGACCCAGAATTAGCTTTACTTTGGG
TCGATAAATAATAACCACCGCTGTATTTT

InterProScan

PANTHER	SSR3 (IPR009779) - T[6-167] 1.6E-63
Pfam	SSR3 (IPR009779) - T[16-167] 3.0E-67

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SSRG_HUMAN	53.704 %	187	1.7E-61