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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  2. Transcript 'KH2012:KH.C11.313.v1...' > 
  3. Transcript 'KH2012:KH.C4.399.v1....' > 
  4. Clone 'ciad069k19' > 
  5. Transcript 'KH2012:KH.L18.18.v2....'

Transcript Model

Transcript Id

KH2012:KH.L18.18.v2.A.SL2-3

Possible name(s)

SSR3

Gene model

KH2012:KH.L18.18

Location

KhL18 [170,679 / 171,692]

Sequences

Amino acid sequence

Length: 168

>KH.L18.18.v2.A.SL2-3
VLGIIMAPKSSNFSKEEELLLQDFGRDLSRKSSVIFYVHALFVSAIPLWLFNRIHQMEML
DNAILFVIGTIFSAYFVALAYKNNKFELKHKIAQKRSDGVAAELNAKMSESESKKISKKE
KDERILWRKNEIAEAESMQLAVFYTNSLFLILLILSSFFFFKSYSPMP

Nucleotide sequence

Length: 689

>KH2012:KH.L18.18.v2.A.SL2-3
ACGTTGTTAAGTGTTAGGGATAATCATGGCACCTAAATCATCGAACTTCAGCAAAGAGGA
GGAACTTTTGCTTCAAGATTTCGGAAGAGATCTATCGCGAAAATCTTCCGTGATCTTTTA
TGTTCATGCGTTATTTGTCTCTGCTATTCCACTATGGCTATTCAATCGCATACATCAAAT
GGAGATGTTGGACAATGCCATTCTCTTTGTAATTGGGACCATTTTCAGTGCCTACTTTGT
CGCCCTAGCTTACAAAAATAATAAGTTTGAGCTAAAGCACAAAATTGCTCAAAAGAGGAG
TGATGGAGTGGCAGCTGAACTTAATGCTAAGATGTCTGAATCAGAATCAAAGAAGATCTC
AAAGAAAGAGAAAGATGAAAGGATCTTGTGGCGTAAAAACGAAATAGCTGAAGCAGAATC
CATGCAGCTTGCAGTGTTCTACACCAACAGCCTTTTCTTGATTCTGCTCATTCTTTCATC
TTTTTTCTTCTTTAAGAGCTACAGCCCAATGCCGTAAGAAATAGTGGTCCCTTTAATTAG
TGCATGTCCGCTATAAGTCCACAATATTAACATTGTCCGCCATGTCCACTATGTAGTAAA
TATTGTAGACATAGCAGACATGCACTAGTTAAAGGGACCCAGAATTAGCTTTACTTTGGG
TCGATAAATAATAACCACCGCTGTATTTT

InterProScan

PANTHER
SSR3 (IPR009779) - T[6-167] 1.6E-63
Pfam
SSR3 (IPR009779) - T[16-167] 3.0E-67

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SSRG_HUMAN 53.704 % 187 1.7E-61