Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'cieg004n15' > 
  2. Transcript 'KH2012:KH.C2.141.v2....' > 
  3. Transcript 'Cisavi.CG.ENS81.R41....' > 
  4. Transcript 'KH2012:KH.C4.81.v1.A...' > 
  5. Transcript 'KH2012:KH.L18.18.v3....'

Transcript Model

Transcript Id

KH2012:KH.L18.18.v3.A.nonSL6-2

Possible name(s)

SSR3

Gene model

KH2012:KH.L18.18

Location

KhL18 [170,464 / 171,775]

Sequences

Amino acid sequence

Length: 190

>KH.L18.18.v3.A.nonSL6-2
VLGIIMAPKSSNFSKEEELLLQDFGRDLSRKSSVIFYVHALFVSAIPLWLFNRIHQMEML
DNAILFVIGTIFSAYFVALAYKNNKFELKHKIAQKRSDGVAAELNAKMSESESKKISKKE
KDERILWRKNEIAEAESMQLAVFYTNSLFLILLILSSFFFFKSYSPMPNYIISMVGASSI
TGLLSTSSQK

Nucleotide sequence

Length: 809

>KH2012:KH.L18.18.v3.A.nonSL6-2
GAAAGATTCTGTGTTGAGTTGTAGAGTGAGGGATTGTGTTGTGTTATGTGTAAGCTGTTT
AACCCCGATAACTGTGCATATAGACGTTGTTAAGTGTTAGGGATAATCATGGCACCTAAA
TCATCGAACTTCAGCAAAGAGGAGGAACTTTTGCTTCAAGATTTCGGAAGAGATCTATCG
CGAAAATCTTCCGTGATCTTTTATGTTCATGCGTTATTTGTCTCTGCTATTCCACTATGG
CTATTCAATCGCATACATCAAATGGAGATGTTGGACAATGCCATTCTCTTTGTAATTGGG
ACCATTTTCAGTGCCTACTTTGTCGCCCTAGCTTACAAAAATAATAAGTTTGAGCTAAAG
CACAAAATTGCTCAAAAGAGGAGTGATGGAGTGGCAGCTGAACTTAATGCTAAGATGTCT
GAATCAGAATCAAAGAAGATCTCAAAGAAAGAGAAAGATGAAAGGATCTTGTGGCGTAAA
AACGAAATAGCTGAAGCAGAATCCATGCAGCTTGCAGTGTTCTACACCAACAGCCTTTTC
TTGATTCTGCTCATTCTTTCATCTTTTTTCTTCTTTAAGAGCTACAGCCCAATGCCAAAC
TACATCATTTCAATGGTTGGAGCAAGCAGCATTACAGGTCTCCTCTCAACTTCTTCCCAG
AAATGAACAAATCCTAGGTCGCATTTGAAGCAATAGCATTTTCAGTGTAATATATGAAGC
GGAAATAAATGAGTGATTATCAATTTGTGGTGTCGGCGCTCGGATTTAGTAAAAGAACAT
GAAATAAAACAAACCAACGCTTTATTGTA

InterProScan

PANTHER
SSR3 (IPR009779) - T[6-189] 3.6E-72
Pfam
SSR3 (IPR009779) - T[16-187] 3.0E-76

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SSRG_HUMAN 52.432 % 207 8.36E-69