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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C3.724.v2....' > 
  2. Transcript 'Phfumi.CG.MTP2014.S3...' > 
  3. Transcript 'Boleac.CG.SB_v3.S814...' > 
  4. Region 'REG00000077' > 
  5. Transcript 'KH2012:KH.L18.18.v3....'

Transcript Model

Transcript Id

KH2012:KH.L18.18.v3.A.SL2-2

Possible name(s)

SSR3

Gene model

KH2012:KH.L18.18

Location

KhL18 [170,464 / 171,692]

Sequences

Amino acid sequence

Length: 190

>KH.L18.18.v3.A.SL2-2
VLGIIMAPKSSNFSKEEELLLQDFGRDLSRKSSVIFYVHALFVSAIPLWLFNRIHQMEML
DNAILFVIGTIFSAYFVALAYKNNKFELKHKIAQKRSDGVAAELNAKMSESESKKISKKE
KDERILWRKNEIAEAESMQLAVFYTNSLFLILLILSSFFFFKSYSPMPNYIISMVGASSI
TGLLSTSSQK

Nucleotide sequence

Length: 726

>KH2012:KH.L18.18.v3.A.SL2-2
ACGTTGTTAAGTGTTAGGGATAATCATGGCACCTAAATCATCGAACTTCAGCAAAGAGGA
GGAACTTTTGCTTCAAGATTTCGGAAGAGATCTATCGCGAAAATCTTCCGTGATCTTTTA
TGTTCATGCGTTATTTGTCTCTGCTATTCCACTATGGCTATTCAATCGCATACATCAAAT
GGAGATGTTGGACAATGCCATTCTCTTTGTAATTGGGACCATTTTCAGTGCCTACTTTGT
CGCCCTAGCTTACAAAAATAATAAGTTTGAGCTAAAGCACAAAATTGCTCAAAAGAGGAG
TGATGGAGTGGCAGCTGAACTTAATGCTAAGATGTCTGAATCAGAATCAAAGAAGATCTC
AAAGAAAGAGAAAGATGAAAGGATCTTGTGGCGTAAAAACGAAATAGCTGAAGCAGAATC
CATGCAGCTTGCAGTGTTCTACACCAACAGCCTTTTCTTGATTCTGCTCATTCTTTCATC
TTTTTTCTTCTTTAAGAGCTACAGCCCAATGCCAAACTACATCATTTCAATGGTTGGAGC
AAGCAGCATTACAGGTCTCCTCTCAACTTCTTCCCAGAAATGAACAAATCCTAGGTCGCA
TTTGAAGCAATAGCATTTTCAGTGTAATATATGAAGCGGAAATAAATGAGTGATTATCAA
TTTGTGGTGTCGGCGCTCGGATTTAGTAAAAGAACATGAAATAAAACAAACCAACGCTTT
ATTGTA

InterProScan

PANTHER
SSR3 (IPR009779) - T[6-189] 3.6E-72
Pfam
SSR3 (IPR009779) - T[16-187] 3.0E-76

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SSRG_HUMAN 52.432 % 207 8.36E-69