Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L18.18.v3.R.ND1-2

Possible name(s)

SSR3

Gene model

KH2012:KH.L18.18

Location

KhL18 [170,464 / 171,746]

Sequences

Amino acid sequence

Length: 190

>KH.L18.18.v3.R.ND1-2
VLGIIMAPKSSNFSKEEELLLQDFGRDLSRKSSVIFYVHALFVSAIPLWLFNRIHQMEML
DNAILFVIGTIFSAYFVALAYKNNKFELKHKIAQKRSDGVAAELNAKMSESESKKISKKE
KDERILWRKNEIAEAESMQLAVFYTNSLFLILLILSSFFFFKSYSPMPNYIISMVGASSI
TGLLSTSSQK

Nucleotide sequence

Length: 780

>KH2012:KH.L18.18.v3.R.ND1-2
GGGATTGTGTTGTGTTATGTGTAAGCTGTTTAACCCCGATAACTGTGCATATAGACGTTG
TTAAGTGTTAGGGATAATCATGGCACCTAAATCATCGAACTTCAGCAAAGAGGAGGAACT
TTTGCTTCAAGATTTCGGAAGAGATCTATCGCGAAAATCTTCCGTGATCTTTTATGTTCA
TGCGTTATTTGTCTCTGCTATTCCACTATGGCTATTCAATCGCATACATCAAATGGAGAT
GTTGGACAATGCCATTCTCTTTGTAATTGGGACCATTTTCAGTGCCTACTTTGTCGCCCT
AGCTTACAAAAATAATAAGTTTGAGCTAAAGCACAAAATTGCTCAAAAGAGGAGTGATGG
AGTGGCAGCTGAACTTAATGCTAAGATGTCTGAATCAGAATCAAAGAAGATCTCAAAGAA
AGAGAAAGATGAAAGGATCTTGTGGCGTAAAAACGAAATAGCTGAAGCAGAATCCATGCA
GCTTGCAGTGTTCTACACCAACAGCCTTTTCTTGATTCTGCTCATTCTTTCATCTTTTTT
CTTCTTTAAGAGCTACAGCCCAATGCCAAACTACATCATTTCAATGGTTGGAGCAAGCAG
CATTACAGGTCTCCTCTCAACTTCTTCCCAGAAATGAACAAATCCTAGGTCGCATTTGAA
GCAATAGCATTTTCAGTGTAATATATGAAGCGGAAATAAATGAGTGATTATCAATTTGTG
GTGTCGGCGCTCGGATTTAGTAAAAGAACATGAAATAAAACAAACCAACGCTTTATTGTA

InterProScan

PANTHER	SSR3 (IPR009779) - T[6-189] 3.6E-72
Pfam	SSR3 (IPR009779) - T[16-187] 3.0E-76

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SSRG_HUMAN	52.432 %	207	8.36E-69