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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S3...' > 
  2. Transcript 'Harore.CG.MTP2014.S3...' > 
  3. Clone 'cign032m07' > 
  4. Transcript 'KH2012:KH.C7.139.v1....' > 
  5. Transcript 'KH2012:KH.L18.18.v4....'

Transcript Model

Transcript Id

KH2012:KH.L18.18.v4.A.nonSL4-1

Possible name(s)

SSR3

Gene model

KH2012:KH.L18.18

Location

KhL18 [170,827 / 171,700]

Sequences

Amino acid sequence

Length: 132

>KH.L18.18.v4.A.nonSL4-1
VLGIIMAPKSSNFSKEEELLLQDFGRDLSRKSSVIFYVHALFVSAIPLWLFNRIHQMEML
DNAILFVIGTIFSAYFVALAYKNNKFELKHKIAQKRSDGVAAELNAKMSESESKKISKKE
KDERCLLEHCLS

Nucleotide sequence

Length: 621

>KH2012:KH.L18.18.v4.A.nonSL4-1
GCATATAGACGTTGTTAAGTGTTAGGGATAATCATGGCACCTAAATCATCGAACTTCAGC
AAAGAGGAGGAACTTTTGCTTCAAGATTTCGGAAGAGATCTATCGCGAAAATCTTCCGTG
ATCTTTTATGTTCATGCGTTATTTGTCTCTGCTATTCCACTATGGCTATTCAATCGCATA
CATCAAATGGAGATGTTGGACAATGCCATTCTCTTTGTAATTGGGACCATTTTCAGTGCC
TACTTTGTCGCCCTAGCTTACAAAAATAATAAGTTTGAGCTAAAGCACAAAATTGCTCAA
AAGAGGAGTGATGGAGTGGCAGCTGAACTTAATGCTAAGATGTCTGAATCAGAATCAAAG
AAGATCTCAAAGAAAGAGAAAGATGAAAGGTGTTTATTAGAACACTGCTTATCTTAGCTT
GAGAGATGTTGTATCACTTAATTATTGTTATAATTTTACAGGATCTTGTGGCGTAAAAAC
GAAATAGCTGAAGCAGAATCCATGCAGCTTGCAGTGTTCTACACCAACAGCCTTTTCTTG
ATTCTGCTCATTCTTTCATCTTTTTTCTTCTTTAAGAGCTACAGCCCAATGCCGTAAGAA
ATAGTGGTCCCTTTAATTAGT

InterProScan

PANTHER
SSR3 (IPR009779) - T[6-127] 1.3E-43
Pfam
SSR3 (IPR009779) - T[16-127] 8.7E-46

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SSRG_HUMAN 55.738 % 140 1.95E-43