Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L18.18.v4.R.ND1-1

Possible name(s)

SSR3

Gene model

KH2012:KH.L18.18

Location

KhL18 [170,827 / 171,746]

Sequences

Amino acid sequence

Length: 132

>KH.L18.18.v4.R.ND1-1
VLGIIMAPKSSNFSKEEELLLQDFGRDLSRKSSVIFYVHALFVSAIPLWLFNRIHQMEML
DNAILFVIGTIFSAYFVALAYKNNKFELKHKIAQKRSDGVAAELNAKMSESESKKISKKE
KDERCLLEHCLS

Nucleotide sequence

Length: 667

>KH2012:KH.L18.18.v4.R.ND1-1
GGGATTGTGTTGTGTTATGTGTAAGCTGTTTAACCCCGATAACTGTGCATATAGACGTTG
TTAAGTGTTAGGGATAATCATGGCACCTAAATCATCGAACTTCAGCAAAGAGGAGGAACT
TTTGCTTCAAGATTTCGGAAGAGATCTATCGCGAAAATCTTCCGTGATCTTTTATGTTCA
TGCGTTATTTGTCTCTGCTATTCCACTATGGCTATTCAATCGCATACATCAAATGGAGAT
GTTGGACAATGCCATTCTCTTTGTAATTGGGACCATTTTCAGTGCCTACTTTGTCGCCCT
AGCTTACAAAAATAATAAGTTTGAGCTAAAGCACAAAATTGCTCAAAAGAGGAGTGATGG
AGTGGCAGCTGAACTTAATGCTAAGATGTCTGAATCAGAATCAAAGAAGATCTCAAAGAA
AGAGAAAGATGAAAGGTGTTTATTAGAACACTGCTTATCTTAGCTTGAGAGATGTTGTAT
CACTTAATTATTGTTATAATTTTACAGGATCTTGTGGCGTAAAAACGAAATAGCTGAAGC
AGAATCCATGCAGCTTGCAGTGTTCTACACCAACAGCCTTTTCTTGATTCTGCTCATTCT
TTCATCTTTTTTCTTCTTTAAGAGCTACAGCCCAATGCCGTAAGAAATAGTGGTCCCTTT
AATTAGT

InterProScan

PANTHER	SSR3 (IPR009779) - T[6-127] 1.3E-43
Pfam	SSR3 (IPR009779) - T[16-127] 8.7E-46

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SSRG_HUMAN	55.738 %	140	1.95E-43