Aniseed - Transcript Card

Transcript 'KH2012:KH.L18.20.v4....'

Transcript Model

Transcript Id

KH2012:KH.L18.20.v4.A.SL3-1

Possible name(s)

ARAF; BRAF; RAF1

Gene model

KH2012:KH.L18.20

Location

KhL18 [566,169 / 569,786]

Sequences

Amino acid sequence

Length: 258

>KH.L18.20.v4.A.SL3-1
ISYSFNPLNIGGSASSDSPHSPIQQNTTASKPGSEKAIGVIRIYLPNGKTTVGAIPGKRL
KEVLLKSARLKSLRDKLDQCSVYRFGTDDHVDWNSDSGILAGVQLELRTEDKSFTKSTRI
LKANHNFARKTFFSLSYCDWCRKILFQGVTCKMCGFKLHQKCINEVPDYCITQIQILELE
KKIRPQTPSPDSPNTPTDTWPVPGSGDFPLYRPRSTSQPSLFINSTAPLGQNSRQPEYNN
YPPAHGKSHPAPTTMLNV

Nucleotide sequence

Length: 1,120

>KH2012:KH.L18.20.v4.A.SL3-1
ACATTTCTTATTCGTTTAACCCATTAAACATTGGAGGAAGTGCTTCTTCAGACTCCCCAC
ACTCACCTATTCAGCAGAACACCACCGCGTCAAAACCTGGATCAGAAAAGGCCATCGGCG
TAATTCGAATCTATCTACCAAATGGAAAAACCACGGTTGGTGCAATTCCTGGCAAACGTT
TAAAAGAAGTACTTCTAAAATCAGCACGACTGAAAAGCCTTCGGGATAAACTGGATCAGT
GCAGTGTGTACCGGTTTGGAACTGATGATCACGTGGACTGGAACAGTGATTCGGGAATTC
TTGCCGGTGTGCAACTCGAACTTCGAACTGAGGACAAGTCTTTTACAAAGTCAACACGCA
TACTAAAGGCAAACCATAACTTTGCGCGAAAAACATTCTTTTCACTCTCCTATTGCGACT
GGTGCAGGAAGATCCTATTTCAGGGCGTCACGTGCAAGATGTGCGGGTTCAAGCTGCACC
AGAAGTGCATCAACGAAGTGCCCGATTACTGCATTACACAAATACAGATACTGGAATTAG
AGAAGAAAATCCGTCCCCAAACCCCGTCTCCCGACTCGCCCAACACCCCTACAGACACTT
GGCCAGTTCCCGGGAGTGGTGATTTCCCTCTTTACCGACCACGGTCCACATCGCAGCCAA
GTCTTTTCATAAACAGTACCGCCCCGCTAGGACAAAACTCAAGGCAGCCGGAATACAACA
ATTATCCGCCCGCCCACGGTAAGTCGCATCCCGCACCCACCACCATGTTAAACGTGTGAC
TCACCCATATAATCATGGTCCCATCAATTCAACGCAAAGTTTCTCTTGTTGTTGTATTTC
CATCGTTATGTCGCGCACATAGATTTTCTCGTAGCGGATCAACAAGCTGTTTCAAAATTG
CACTATTCATGTGAAATTTGTGATGCGGTGATCTGTTCCGTGATATACCAATCATATTTG
TTCATGAGACTTGTAAAACGCGCTCTGACCTCATCATATAGTCTGGTTTAAAACGTCAAT
TCTGTTACTGAAGACATAGACCACGCACTGTGGTACTTTATGGTAGTTCTGTAGCTCTGT
AGACGGTCAAAGCTAGCGTTACCTGTAGTTATAACATTAA

InterProScan

SUPERFAMILY	Ubiquitin-like_domsf (IPR029071) - T[40-108] 2.03E-11
Pfam	RBD_dom (IPR003116) - T[41-107] 3.2E-8
ProSiteProfiles	PE/DAG-bd (IPR002219) - T[124-170] 13.432
SMART	PE/DAG-bd (IPR002219) - T[125-170] 3.3E-8
ProSitePatterns	PE/DAG-bd (IPR002219) - T[125-170] .
Pfam	PE/DAG-bd (IPR002219) - T[125-171] 1.6E-10
CDD	PE/DAG-bd (IPR002219) - T[125-170] 1.3437E-11

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
BRAF_HUMAN	36.429 %	103	6.58E-25
RAF1_HUMAN	34 %	98.6	2.16E-23
ARAF_HUMAN	32.889 %	116	1.2E-29