- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.L18.20.v6....' >
- Clone 'ma126o24' >
- Molecular Tool 'Hox1-TALEN (Yoshida 2017)' >
- Transcript 'KH2012:KH.L18.20.v7....'
Transcript Model
Transcript Id
KH2012:KH.L18.20.v7.A.SL3-2
Possible name(s)
ARAF; BRAF; RAF1
Gene model
Location
KhL18 [560,952 / 569,786]
Amino acid sequence
Length: 571
>KH.L18.20.v7.A.SL3-2
ISYSFNPLNIGGSASSDSPHSPIQQNTTASKPGSEKAIGVIRIYLPNGKTTVGAIPGKRL
KEVLLKSARLKSLRDKLDQCSVYRFGTDDHVDWNSDSGILAGVQLELRTEDKSFTKSTRI
LKANHNFARKTFFSLSYCDWCRKILFQGVTCKMCGFKLHQKCINEVPDYCITQIQILELE
KKIRPQTPSPDSPNTPTDTWPVPGEYNNYPPAHGFPQGVGLAQNAAVASLPAPVVVHRDP
SHRRSHSPRRDSNEDWEVPEEEIEWGDKIGSGSYGIVYRCRWHGIVAVKVLNVSNPTPSQ
LQEFKNEVAVLRKTRHVNILLFMGYTIKNQLCIVTQWCDGSSLYRHLHMIDTKFDMLQTI
NIARQTAQGMEYLHAKNIIHRDMKSNNIFLLEDYTVKIGDFGLATVKSRWSGSEQLMQPT
GSILWMAPEVIRMIDGNPYTFQSDVYAFGVVLYEMTSNTLPYSHIGNRDMILFQVGRGYL
SPDLDLIRSDTPRSCRKLIVDCIKKNREDRPLFPQIWGDLDKIYKALPRICRSQSDPCSI
NRAGSSSSEDFFRLILPKSTRTQNSTTLVSP
Nucleotide sequence
Length: 2,405
>KH2012:KH.L18.20.v7.A.SL3-2
ACATTTCTTATTCGTTTAACCCATTAAACATTGGAGGAAGTGCTTCTTCAGACTCCCCAC
ACTCACCTATTCAGCAGAACACCACCGCGTCAAAACCTGGATCAGAAAAGGCCATCGGCG
TAATTCGAATCTATCTACCAAATGGAAAAACCACGGTTGGTGCAATTCCTGGCAAACGTT
TAAAAGAAGTACTTCTAAAATCAGCACGACTGAAAAGCCTTCGGGATAAACTGGATCAGT
GCAGTGTGTACCGGTTTGGAACTGATGATCACGTGGACTGGAACAGTGATTCGGGAATTC
TTGCCGGTGTGCAACTCGAACTTCGAACTGAGGACAAGTCTTTTACAAAGTCAACACGCA
TACTAAAGGCAAACCATAACTTTGCGCGAAAAACATTCTTTTCACTCTCCTATTGCGACT
GGTGCAGGAAGATCCTATTTCAGGGCGTCACGTGCAAGATGTGCGGGTTCAAGCTGCACC
AGAAGTGCATCAACGAAGTGCCCGATTACTGCATTACACAAATACAGATACTGGAATTAG
AGAAGAAAATCCGTCCCCAAACCCCGTCTCCCGACTCGCCCAACACCCCTACAGACACTT
GGCCAGTTCCCGGGGAATACAACAATTATCCGCCCGCCCACGGCTTCCCGCAAGGAGTCG
GCTTGGCGCAGAATGCCGCTGTGGCGAGTCTTCCCGCACCAGTTGTCGTGCACAGGGACC
CAAGTCACAGACGAAGTCACTCCCCTCGGCGGGATTCGAACGAAGACTGGGAGGTTCCTG
AAGAAGAAATCGAATGGGGGGATAAGATCGGGTCCGGGTCGTACGGAATCGTGTACAGAT
GTCGTTGGCATGGGATCGTCGCAGTGAAGGTCCTTAATGTATCAAACCCCACACCTTCTC
AACTACAGGAGTTTAAAAACGAAGTCGCAGTTCTAAGGAAAACCCGGCACGTGAACATCC
TCCTATTCATGGGTTATACAATTAAGAATCAACTATGTATAGTGACGCAGTGGTGCGACG
GCTCAAGTCTTTATCGCCACCTGCATATGATCGACACTAAGTTCGACATGCTGCAGACCA
TCAACATCGCTCGACAGACCGCACAGGGCATGGAATATCTCCACGCCAAGAACATCATAC
ACAGAGACATGAAGTCTAACAATATTTTTCTTCTCGAAGACTACACGGTTAAAATCGGCG
ACTTCGGTCTGGCCACTGTCAAGTCAAGGTGGTCAGGTTCGGAGCAACTAATGCAACCAA
CGGGTTCTATTTTATGGATGGCGCCAGAGGTGATCCGTATGATAGATGGGAATCCTTACA
CGTTCCAATCAGATGTCTACGCATTTGGCGTCGTGCTGTACGAGATGACGTCTAACACAC
TCCCATACAGTCACATTGGCAACAGAGACATGATCCTCTTCCAGGTAGGAAGAGGATATC
TCAGTCCAGATCTTGATCTCATCCGGAGCGACACTCCTCGATCCTGTCGGAAGCTCATCG
TGGATTGCATCAAGAAGAACAGAGAGGATCGACCTTTGTTTCCTCAGATTTGGGGAGATC
TCGACAAGATTTACAAAGCGCTCCCAAGAATATGCAGAAGTCAGTCCGACCCTTGCTCCA
TAAACCGCGCCGGTTCCTCGTCAAGTGAAGACTTTTTTCGATTAATTTTACCGAAGTCAA
CAAGGACCCAAAATTCGACTACCCTTGTCAGTCCTTAATTGGACACACGCGGTCGCTTAA
CAGATTTCACGGTCGAGTTTAGGTAATTAAATGCATCAAGTGAGCAGTGTGATATGCATT
TGTTTTAGCTCCATTCTTTTTAATATGCCCCTGCGTGTTTGTCAAAATATCAAGGTATGC
CTCCAGCACAAGCAGCGGTTGCGGGGCCCAACACACGTACATGAATCAAGCGTTACCTAG
ACAGCGCGATTCCGCAGAGGGCGTTTGTAACCTGTTTCATAACCTTTCCAGTTTCGTGCG
AAACTTTGCTTGGCTAACTTGTAATCCCGCTTTTTAACGCTAGGAAAATACGAGGCGAGC
ACTGACGGAGATAACTTGTTGGCACTTACTTTTTCCAGCTACGTTTATACTTGATGTATC
GCAATTTAGGTTTCCATTCTATGCTTTGTAGATCATACCTTTGTTCCTTACTGACCTCGC
CTTCTTTGGGCGTGGTGTATCCTCACTAACGGTGATCTTGCTAAACCGAGAAGTAAGCCA
ACTGGTCCACGCTTTGCACTAAACAGCCAATACACCATTAAGAATTCTGACCCAGTTGCT
AATTGCGCGAATGTTTCAAAGCAGAAATATAGTAACCGTATATCGTATTTCGTTTTTCCG
CCTGAATTTATTTGCGATGATTTTAATCGAAGATGCAACTATAAAACATACATCAAGAAT
TTCTA
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[40-108] 1.14E-10 |
| Pfam |
RBD_dom (IPR003116) - T[41-107] 1.1E-7 |
| ProSiteProfiles |
PE/DAG-bd (IPR002219) - T[124-170] 13.432 |
| SMART |
PE/DAG-bd (IPR002219) - T[125-170] 3.3E-8 |
| Pfam |
PE/DAG-bd (IPR002219) - T[125-171] 5.0E-10 |
| ProSitePatterns |
PE/DAG-bd (IPR002219) - T[125-170] . |
| CDD |
PE/DAG-bd (IPR002219) - T[125-170] 2.50757E-11 |
| SUPERFAMILY |
Kinase-like_dom_sf (IPR011009) - T[249-544] 1.75E-74 |
| ProSiteProfiles |
Prot_kinase_dom (IPR000719) - T[263-527] 42.322 |
| SMART |
Prot_kinase_dom (IPR000719) - T[263-524] 5.0E-60 |
| Pfam |
Prot_kinase_dom (IPR000719) - T[266-516] 8.1E-56 |
| ProSitePatterns |
Protein_kinase_ATP_BS (IPR017441) - T[269-289] . |
| ProSitePatterns |
Ser/Thr_kinase_AS (IPR008271) - T[378-390] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BRAF_HUMAN | 68.317 % | 445 | 1.61E-148 |
| RAF1_HUMAN | 63.259 % | 422 | 4.15E-141 |
| ARAF_HUMAN | 45.548 % | 485 | 3.22E-166 |