Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.L153.22.v2...' > 
  2. Region 'REG00001241' > 
  3. Transcript 'KH2012:KH.C10.195.v1...' > 
  4. Molecular Tool 'Ci-type IX-Col1α-chain MO' > 
  5. Transcript 'KH2012:KH.L19.14.v1....'

Transcript Model

Transcript Id

KH2012:KH.L19.14.v1.A.SL2-1

Possible name(s)

CSRNP1; CSRNP2; CSRNP3

Gene model

KH2012:KH.L19.14

Location

KhL19 [50,499 / 57,570]

Sequences

Amino acid sequence

Length: 648

>KH.L19.14.v1.A.SL2-1
ISYFIKLTNSGFTAALISRNMDPTEVTSDNGNEDFDKTPKILFSKQKFDENLNEIEKNDP
SESNLDCFIQSEASTTTNSGHCDVINDDLSKSFAEKCKKTEVSDLNENIVNSNSGKVEAI
SNTTPAVHSGLSIEINDISLKVEKSSKKMPENSYAYTNNSEEQTLTNEEKLGVKHTLDNG
VEDLGVSEELSAESFNSNPSPNSNDELSLDSGIVSLDDQEADKMNPNEMNPSNNRKRLRS
SLVSDQSAKRERKLLGKKVMFEKVKIFFFPRKQSFITVPSQGGSTLGMDLKHNGFKELTL
EQHKISIARRRRLAIKEHDRQQRIESKLRQLRQTYPNHEHGDLISMIDEPELVESDSSSD
EIDQPENDDYFFLQPIPTKKRRFMLRMSGVQKIDSEEKLTNRLTRESREVCGCDCVGVCS
PATCQCSIAGIPCQVDRESFPCGCLESGCSNNSGRVEFDASRVRNHYLKTMGRLRIVSSG
ILPQDTLAVPTTALYSPYVESMIMTSQSQNNGQVNHHNYTQDKHCHQVAESWSNHTEEVE
SNTIRFTAPENISSRFESQFYGSTRTSPLQGGSEQRMKLEPIASFLSTTNQKPASNNKEF
ILDVIGQPSHTQPTNHAAPNVTYCGASPTQDCAIVGVASSQNQDSVTA

Nucleotide sequence

Length: 3,059

>KH2012:KH.L19.14.v1.A.SL2-1
GTAAATAAGTTATTTTATAAAATTGACAAATTCTGGTTTCACTGCTGCGTTAATTTCGAG
AAATATGGATCCCACTGAAGTAACTTCTGATAATGGAAACGAAGATTTTGATAAAACACC
TAAAATTTTGTTCTCGAAACAAAAGTTTGATGAAAACTTAAATGAAATAGAAAAAAATGA
CCCTAGCGAATCAAATTTGGATTGTTTTATCCAATCAGAAGCAAGCACAACAACGAATTC
TGGGCATTGTGATGTCATAAATGATGATCTCAGCAAAAGTTTTGCGGAAAAATGTAAAAA
GACGGAAGTTTCTGATTTAAATGAAAATATTGTGAACAGCAATTCAGGAAAAGTTGAAGC
CATTTCAAACACAACACCCGCTGTGCATAGTGGTTTGTCCATTGAAATTAATGACATCAG
TCTTAAAGTAGAAAAAAGTTCGAAAAAAATGCCGGAAAATTCTTACGCATATACTAATAA
TAGCGAGGAACAAACTTTAACAAATGAAGAAAAACTTGGAGTAAAACATACTTTGGATAA
CGGGGTTGAAGATTTGGGTGTTAGCGAGGAATTATCTGCCGAAAGTTTCAATTCAAACCC
GTCTCCCAACTCCAACGATGAATTGTCGCTCGATTCCGGGATTGTCTCGTTAGACGACCA
AGAAGCAGATAAAATGAACCCAAATGAGATGAATCCATCAAATAACAGGAAGCGATTAAG
AAGTAGTTTAGTTTCCGACCAATCAGCGAAACGAGAACGAAAATTGTTGGGCAAGAAAGT
GATGTTCGAGAAAGTAAAAATCTTCTTTTTTCCACGAAAACAAAGTTTCATCACCGTACC
AAGCCAAGGGGGTTCAACATTAGGAATGGATTTAAAACACAACGGATTTAAAGAACTAAC
TTTGGAACAACATAAGATTTCTATTGCTCGGCGAAGACGGTTAGCGATAAAGGAACACGA
TCGGCAACAAAGGATTGAATCGAAGTTAAGGCAGCTTCGTCAAACGTATCCAAACCATGA
ACATGGAGATCTTATATCGATGATCGATGAACCGGAACTCGTCGAGTCTGATTCCTCGTC
GGATGAAATCGATCAACCCGAAAATGACGATTATTTCTTCTTACAACCAATCCCAACCAA
AAAACGCCGATTCATGCTGCGAATGTCAGGGGTCCAAAAGATTGATTCCGAGGAAAAACT
GACGAACCGTTTAACTCGTGAGTCGCGCGAGGTTTGTGGATGCGACTGCGTTGGTGTTTG
TTCACCTGCTACCTGCCAATGCTCAATAGCTGGCATCCCTTGTCAGGTGGATCGCGAATC
TTTCCCGTGCGGGTGTTTGGAGTCCGGATGTTCCAACAATAGTGGAAGAGTTGAGTTTGA
CGCGAGTCGTGTCAGGAATCATTACCTCAAAACTATGGGGAGGCTGAGGATTGTCTCGTC
GGGGATCTTACCACAAGATACCTTGGCTGTTCCAACCACTGCATTATACTCCCCGTATGT
GGAATCCATGATTATGACATCACAATCTCAAAACAATGGCCAAGTCAACCATCACAATTA
CACACAAGATAAACATTGCCATCAAGTGGCAGAATCTTGGTCCAACCACACGGAGGAAGT
AGAGAGTAACACGATACGCTTCACTGCCCCGGAAAATATCTCGTCACGATTTGAATCTCA
GTTCTACGGCAGCACGCGCACCTCACCACTACAGGGCGGTAGTGAGCAACGAATGAAACT
TGAACCAATAGCGAGCTTCCTTTCAACCACCAATCAGAAGCCAGCGTCAAACAACAAAGA
GTTTATCCTTGACGTGATTGGACAACCAAGTCACACACAACCGACCAATCACGCGGCACC
AAACGTCACATACTGTGGGGCGTCGCCCACACAGGATTGCGCAATAGTGGGCGTGGCGTC
CTCACAAAACCAAGATTCTGTCACAGCTTAAACAACATTAAGTAAACCAAGGACATTATA
TTTATATTTTGATCTTTCAGTGAGGATTTCCTGAACAACATATTCCGACTGAGTTTTACT
CAGATAAGGACAACCTATATAGGCCGTTGTACGTGGAAAAGTCGTCAGAAAATTTCATGC
AGAGAAGCCGCACTACAAGTAAAAGATGACAACCACACTATATAAGTTTCTTGTATAAGG
GTTTTGTTCACAAATAATGCCCCCATATTTTCCACACATGACGCACACAATGCTTCAGCA
GGGGGGCTGAACTTGACCTTTACTCGAATTGTTGGATTGATACCACGGATGCATAAAAAC
TAAAAACTTCAAACATTTTACAAGATAAACACCACTAAAGCAAAATACATTAAATATATT
AGTGATGTGACGTACATTTCCCAGTAATGAGAAAATAGACAACATTTTCGAGTGGGGAGC
AAAATGTTGTTACTTTATGATATCTATGTTATTCAAATGCAGTATACACACTTTGTGTGA
TGTCATAGTAGTGTATTATTTCATCATCGGTACTTCTGCAGATACAGGTTGCAACCATTA
GCAATGCTACAAACAGTGGCGTAACCAGAAACATAATAAGGAATAGGTTTAAACAAAAAT
TTTAACAAGTTGTTTTTGTTTAAATTTTGGGGGTGCCGAACTCCCAACCTCCCCCCTGGT
TGCGCCACTGCTACATACCTGTGAAACAAAATGCCTCTTTTTGTATTCTTTTTATGCTTA
GGACATTTTCCTTTGTTTGTTTATTTGACAGACATTCATATTTATTAGGAAATTTGGTTC
TGTAAAAATTAGTAAAATTTTGATTTTCAAATGTTTTTTTATACAACAAGTTTTAGGTCA
AATTTTTGCACAGATTTACATTAAGTGCTAACTACTCAACTAATTGTATTTTTTAGCTAC
TTTGGTTAAAACCAGTTAAAAAAATAAATTGAAATTTCGTTTTTAAGAAAACAATTTTTT
TTTGGAAATTGAAATATTTCGAAAACCTTTTTGCATAAGATAAAGTAGAAAATAAAAATG
ATGAAATTGATGTTTTGAGTTTGTGGTGGTTACTTAACTACACGTGTTATTTATTTTAG

InterProScan

PANTHER
Cys/Ser-rich_nuc_prot (IPR023260) - T[44-479] 8.0E-133 - T[482-647] 8.0E-133
Pfam
CSRNP_N (IPR031972) - T[257-476] 2.8E-85
PRINTS
Cys/Ser-rich_nuc_prot (IPR023260) - T[379-392] 5.7E-14 - T[404-415] 5.7E-14 - T[419-435] 5.7E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CSRN3_HUMAN 44.622 % 217 2.72E-62
CSRN2_HUMAN 44.828 % 209 5.86E-60
CSRN1_HUMAN 39.827 % 170 2.0E-45