Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L22.13.v1.A.nonSL1-2

Possible name(s)

LSM10; LSM2; LSM4

Gene model

KH2012:KH.L22.13

Location

KhL22 [103,022 / 104,831]

Sequences

Amino acid sequence

Length: 116

>KH.L22.13.v1.A.nonSL1-2
GMAASSREKFYANNTLAVLLIAMENNNVRVETKNESLIKGRLINCDGFGNLNLINATIIN
VRGTKIKVDEIYIKASSVRYVQLPSKINPIEEIEKHISRSKQRKPQMPAKYKKEKT

Nucleotide sequence

Length: 822

>KH2012:KH.L22.13.v1.A.nonSL1-2
ATTGCATCGATTAGGGAAAACACCTATAGTACCAAATTGAGTATAATTATATAAACGTAT
TAAAGTCTTGAAACTGCTTTGCATGAACAATTGAATACATATTGATATGCTACGAAGAAA
ACCTTCAAAAATTAAACTACAAGTTGAAGATCTTCAAGATTATCTGAATCATTGTAAAGA
AACGAACAAAGGAAAACAGAGTCACAGCGAAACAATAACTAAAGATTTTGATGTAAATCA
AACGTTCACGACTATACCGGCAAATCCAGGCGGTATTCGAAACACACGGTCTAGAGCAGA
AGTTCATCGTAGAATTGGATATCAACCTCAACCTATAACTCCAGAAAGTACTTCACAGTA
CAATAATATTCATTAGAGAGATTCGATCAAGTGAGGCATGGCAGCTTCAAGTCGAGAAAA
ATTTTACGCAAATAACACTTTAGCTGTTCTTTTGATTGCAATGGAAAATAACAATGTTAG
GGTTGAAACTAAGAATGAAAGTCTAATTAAAGGTCGTCTAATCAATTGTGACGGCTTCGG
TAATCTGAATTTAATAAATGCAACTATTATCAATGTTAGAGGAACAAAAATTAAAGTGGA
TGAGATTTATATAAAGGCATCATCCGTGAGGTATGTACAACTCCCAAGTAAGATTAACCC
GATTGAAGAAATAGAGAAGCACATCTCTCGTTCAAAACAGAGAAAACCACAGATGCCTGC
TAAGTATAAAAAAGAAAAAACTTAATCTTCTTGTACATTCACATAAAACTCTGCATGTTG
ATTTAAATGTTTTATATACACAATACAACCAAAATTAAGTTA

InterProScan

SMART	LSM_dom_euk/arc (IPR001163) - T[18-83] 3.3E-5
SUPERFAMILY	LSM_dom_sf (IPR010920) - T[19-103] 7.3E-14
Pfam	LSM_dom_euk/arc (IPR001163) - T[22-82] 7.3E-10

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value