- Transcript 'KH2012:KH.L22.19.v1....'
Transcript Model
Transcript Id
KH2012:KH.L22.19.v1.B.ND1-1
Possible name(s)
MRC1; MRC2; PLA2R1
Gene model
Location
KhL22 [579,297 / 603,481]
Amino acid sequence
Length: 1,088
>KH.L22.19.v1.B.ND1-1
WLSDSTGAPIIFNGNSDQDTQVTNLFPRPIIARHVRCHPVESKDNIALRLEYIGCRASCL
FKIGMNSGYIQDNMISASSFAQGKEAKQARPPVDKAECLANAKDDGESYRGWISKTQDGT
VCQKWSSQTPHSHDRTPQNYPDSGLVSNFCRNPDGEKGPWCYTTDPNVRWTYCTVPVCPS
YVAAGWTPLTVNAAQWVQVQFDSYYKVSGITMYGNTATYVSQYVFQFSDDGINFSTYKSQ
NGDEHIFNGLDGQGSEFTDILREPITTMYVRVQPRKWVGTIRMQFEINGCYINQRYSCSV
YRCDKDWKAWKDHCYYFSPKNVAMDWHDAQADCQSRGANLVSILSLAENDFIESMITQGD
RGGDVWIGMNDLRTQNYYEWVDDSVVTMTKWNFREPNGKGERCVNIYRLLGYWNDNSCDA
TLPYICKQEKQLLPPIPPDEVVIDEGCDAGWSGYGSSCYKASTDEYMFIYSNRHCEEINS
NLVSIHDDYEQAFVHSLVTTTIPPGLGYTAWIGLAAKSTITGEPYYTWENGDPVTYTHWG
TDQPSKKRIKQCLMLIGFWEIDICGQNRYYVCEKDRVGFTQPVLTTLPTTGNCYPGWHGD
STTAYCYQYDDANRNQRLTWYDARDYCRAQGGDLVSVHSSEERDSIINFVTNGAVGSYTY
FWMGLNNLGLNTGYQWTDGSAVSFTDWSVGEPNNVNGEENCVECQFYTDSYTWNDLSCDT
SRNFICKIIKDKVPSTPPPPQEDLGYPDPNNCGTDETWLRFKTSYNSEKCYAFISSTEYG
WSYAQQSCLGKGGNLVAIHSEDENAFVTNRAQKATAGSMWIGLRDVGSRAFYWADGSNLD
YVNWAPSEPNNFYDSEGCTVVSSDTGMWNDDNCGRLYGYVCEKYVGASSVTVPPTAQATG
NCPTGYVPYGNACYMTPGDSVKYDWTTARQWCTNNSAELAVLGNEYEQAFLEQYLWGKGD
SFWIGMTDREQNSNAFVWIDQSEVSYTNWAPGEPNGYSEGCVLMKVNTDDKGAWFDMDCS
TQTSFACYVRKSNGNPPPPVTVSPIGCPAGYYSLVSGQSCFKLVDQPASWSDAKTACRNE
DWIVGLME
Nucleotide sequence
Length: 3,856
>KH2012:KH.L22.19.v1.B.ND1-1
TGGCTCTCAGATTCAACAGGAGCTCCAATTATTTTTAATGGAAATTCTGACCAAGACACA
CAAGTTACTAACCTGTTCCCACGACCAATCATTGCCCGCCATGTAAGGTGTCATCCAGTT
GAATCAAAAGACAACATCGCGTTGAGATTAGAATATATTGGGTGTCGGGCATCGTGTTTG
TTCAAGATAGGAATGAACTCGGGCTATATTCAAGACAACATGATCTCGGCATCTTCTTTT
GCTCAAGGAAAGGAAGCAAAACAAGCTCGTCCTCCAGTAGATAAGGCCGAATGTCTTGCT
AATGCAAAGGATGATGGAGAAAGTTATAGGGGTTGGATCTCAAAGACTCAAGATGGAACT
GTTTGCCAGAAATGGTCGTCTCAAACTCCCCATTCACATGACAGAACACCACAGAATTAT
CCAGACTCTGGTTTAGTGAGCAACTTCTGCAGGAATCCTGATGGTGAAAAAGGTCCATGG
TGTTACACTACAGATCCTAATGTTAGGTGGACTTACTGTACAGTACCTGTTTGCCCAAGT
TATGTTGCCGCTGGATGGACACCTTTAACTGTAAACGCAGCTCAGTGGGTTCAAGTACAA
TTTGATTCTTACTACAAGGTATCTGGCATCACCATGTACGGAAACACAGCAACATATGTA
TCTCAGTATGTTTTCCAATTCAGTGATGATGGAATTAATTTCTCAACATATAAATCACAG
AATGGAGATGAACATATCTTCAATGGATTAGATGGTCAAGGAAGTGAGTTTACCGACATT
CTCCGTGAACCAATAACAACAATGTATGTTCGTGTTCAACCACGGAAGTGGGTGGGAACT
ATCAGGATGCAATTTGAAATCAATGGATGTTATATTAATCAGCGATACTCATGCTCTGTA
TATCGCTGTGACAAGGACTGGAAAGCATGGAAGGACCATTGTTATTATTTCTCGCCTAAG
AACGTTGCAATGGATTGGCATGATGCGCAAGCTGACTGTCAAAGCCGTGGTGCTAACCTT
GTATCTATTCTATCTCTTGCTGAAAACGACTTTATTGAGTCAATGATAACTCAGGGAGAT
CGTGGTGGTGATGTTTGGATTGGAATGAATGACCTTCGAACACAGAATTATTACGAATGG
GTTGATGATAGTGTCGTCACCATGACTAAGTGGAATTTCAGAGAACCAAATGGAAAGGGA
GAAAGATGTGTCAACATTTACCGACTACTTGGATATTGGAATGACAATAGTTGTGATGCA
ACTCTTCCTTATATTTGTAAACAAGAGAAACAACTTCTTCCACCCATCCCCCCAGATGAA
GTGGTTATTGATGAGGGATGTGATGCTGGTTGGAGTGGATATGGATCATCATGTTACAAA
GCAAGTACAGACGAATACATGTTCATTTATTCCAACCGACATTGTGAAGAGATTAATAGC
AACTTGGTCAGCATACATGATGATTATGAACAAGCATTTGTGCATTCACTTGTTACAACC
ACCATTCCACCTGGTTTGGGATACACAGCATGGATTGGATTGGCAGCAAAATCTACAATC
ACTGGTGAACCTTATTATACGTGGGAGAACGGAGATCCAGTCACTTACACACATTGGGGA
ACTGACCAACCAAGTAAGAAAAGAATAAAACAATGTCTAATGCTAATAGGTTTTTGGGAG
ATTGACATTTGTGGTCAGAATCGATATTATGTTTGTGAAAAAGACAGGGTTGGTTTCACA
CAACCAGTTCTAACTACTTTACCCACAACTGGTAACTGTTACCCTGGTTGGCATGGAGAT
TCAACAACAGCTTATTGTTACCAGTATGATGATGCTAATCGTAACCAGCGACTAACTTGG
TACGACGCTCGTGATTATTGCCGAGCGCAAGGGGGGGACCTTGTGTCTGTCCACAGTTCT
GAAGAGCGGGATTCTATTATCAACTTTGTTACAAACGGAGCAGTTGGTTCTTACACTTAT
TTCTGGATGGGTTTGAACAACTTGGGTTTAAATACTGGATACCAATGGACAGATGGTAGT
GCTGTATCCTTCACTGATTGGTCAGTGGGTGAACCAAATAATGTAAATGGTGAAGAAAAC
TGTGTTGAATGCCAATTCTATACTGATTCATACACGTGGAATGATCTAAGTTGTGATACT
TCAAGAAATTTCATTTGTAAAATAATTAAAGACAAAGTTCCATCCACCCCTCCACCACCT
CAAGAAGACCTTGGTTACCCAGACCCTAACAATTGTGGCACAGATGAAACATGGCTTCGC
TTCAAAACCTCGTACAACTCTGAGAAATGTTACGCTTTCATATCATCAACTGAATATGGA
TGGAGTTACGCGCAACAAAGCTGTTTGGGCAAAGGAGGGAATCTAGTGGCCATTCATAGT
GAAGATGAAAACGCCTTTGTCACAAACAGAGCCCAAAAAGCAACAGCAGGGTCTATGTGG
ATTGGACTTCGTGATGTTGGAAGCAGAGCATTTTACTGGGCTGATGGAAGTAACCTTGAT
TATGTGAACTGGGCACCAAGTGAACCAAACAACTTCTATGATAGTGAAGGATGCACAGTG
GTGTCTTCTGATACTGGAATGTGGAATGATGATAATTGTGGACGACTTTATGGATATGTT
TGTGAGAAATATGTTGGGGCTTCATCTGTCACAGTACCACCTACAGCGCAAGCTACTGGG
AACTGTCCAACAGGATATGTACCTTATGGCAATGCCTGCTACATGACACCAGGAGATAGT
GTCAAATATGATTGGACCACTGCAAGACAGTGGTGTACGAATAACTCTGCTGAGTTGGCA
GTGCTGGGTAATGAGTATGAACAGGCATTCTTGGAGCAATACTTATGGGGAAAAGGTGAC
TCATTCTGGATTGGTATGACTGACCGTGAACAAAACTCAAATGCTTTTGTTTGGATTGAC
CAATCTGAAGTTAGCTACACAAACTGGGCTCCAGGAGAACCTAACGGATATTCTGAAGGA
TGTGTTTTAATGAAAGTTAACACTGATGACAAAGGTGCATGGTTTGACATGGATTGTAGC
ACACAAACTTCATTTGCTTGTTATGTTCGGAAGTCCAATGGTAACCCTCCCCCACCAGTA
ACTGTCAGTCCAATTGGTTGTCCAGCTGGTTACTATAGTCTGGTATCTGGACAGTCTTGC
TTTAAACTTGTTGATCAACCCGCTTCATGGAGCGATGCAAAGACAGCCTGTAGAAATGAA
GACTGGATTGTGGGTTTGATGGAATAGATGAATCTTACTGCGTATCAAGACGTGGTTGTT
GTTGGGATCCTGAGTTTGTTGGCGGGAACAACACTGGCTGTTTCTATCCTGAAGGTACTG
CAGCAGGACCATCAGGCATTCCTGTTGCTCCATCACAAAACCCTGTAGGTGGTGGTTTAT
CTGGTGGTGCAATTGCCGGCATCATCATTGGGGTTATTGTGGCCATTGTATTGGTTGGAG
TTGGTATTTATTACTGTAGAGGCAGCTCAGGTAAGAGCTTGCCATCTGTGAGCCTTCCAT
CATGGTCTGGTTCGTCAACAACTACTTCTGCACCACCTGCAAGTGAAGGAAAGGGTGGAT
TCGAAAATCCTATGTCTTTAGATGATACCGGGAATATCCACAGCATAGCATGAAAATGCA
GCTTCTACTTGAACTCTTGTAATATTTAATACTAAATGGTTGTGTAAAACGAATACTGTT
TCATATATCTAACGTGTTTTATTTACGTTAATTAATCGTTTTCAAACCTTTGAGTTCGAA
TAAGATAGTTTCTGATGTTATCGTTTTTCATATCACTACGTTTTTTTGAAAATGTCGAAA
TTTATTCTGAATGAAA
| Gene3D |
Galactose-bd-like_sf (IPR008979) - T[1-57] 4.5E-13 - T[182-291] 1.9E-23 |
| ProSiteProfiles |
FA58C (IPR000421) - T[1-55] 15.82 - T[186-290] 21.637 |
| SUPERFAMILY |
Galactose-bd-like_sf (IPR008979) - T[5-56] 1.13E-10 - T[59-90] 1.86E-23 - T[179-290] 1.86E-23 |
| Gene3D |
Kringle_sf (IPR038178) - T[58-181] 5.6E-35 |
| SMART |
Kringle (IPR000001) - T[96-180] 4.1E-39 |
| Pfam |
Kringle (IPR000001) - T[103-178] 2.7E-26 |
| SUPERFAMILY |
Kringle-like (IPR013806) - T[103-183] 2.13E-33 |
| ProSiteProfiles |
Kringle (IPR000001) - T[105-178] 26.051 |
| ProSitePatterns |
Kringle_CS (IPR018056) - T[149-161] . |
| Pfam |
FA58C (IPR000421) - T[185-281] 4.0E-14 |
| Gene3D |
C-type_lectin-like/link_sf (IPR016186) - T[292-430] 1.1E-36 - T[444-579] 1.5E-26 - T[590-736] 2.9E-41 - T[750-884] 1.8E-33 - T[887-1033] 4.7E-33 |
| SUPERFAMILY |
CTDL_fold (IPR016187) - T[299-435] 1.46E-38 - T[437-576] 9.79E-28 - T[593-741] 1.99E-36 - T[769-894] 2.62E-36 - T[890-1030] 5.31E-35 - T[1036-1080] 1.83E-5 |
| SMART |
C-type_lectin-like (IPR001304) - T[303-427] 1.3E-35 - T[447-573] 6.4E-26 - T[593-727] 1.1E-32 - T[752-882] 5.4E-34 - T[902-1028] 8.7E-31 |
| ProSiteProfiles |
C-type_lectin-like (IPR001304) - T[310-427] 26.01 - T[454-573] 20.109 - T[602-727] 25.101 - T[766-882] 25.664 - T[909-1028] 23.104 |
| Pfam |
C-type_lectin-like (IPR001304) - T[323-427] 2.9E-21 - T[472-574] 1.2E-10 - T[617-727] 2.3E-21 - T[779-883] 2.9E-18 - T[922-1028] 1.9E-18 |
| ProSitePatterns |
C-type_lectin_CS (IPR018378) - T[403-426] . - T[701-726] . - T[858-881] . - T[1001-1027] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MRC1_HUMAN | 31.266 % | 382 | 7.76E-113 |
| MRC2_HUMAN | 30.492 % | 334 | 7.4E-96 |
| PLA2R_HUMAN | 26.335 % | 246 | 6.74E-67 |