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  1. Transcript 'KH2012:KH.L22.20.v1....'

Transcript Model

Transcript Id

KH2012:KH.L22.20.v1.A.ND1-1

Possible name(s)

GPATCH3

Location

KhL22 [496,264 / 504,161]

Sequences

Amino acid sequence

Length: 549

>KH.L22.20.v1.A.ND1-1
EHVKRYIMESSSTPVFVIVRNIPLSYRSADLRRFFSDAVENESFSCFHFKHRPEHRPQKQ
QKKDVNTVSMKETSTFVCIASLRTCAQRHNFVTKYNKKYWDDKEGNMLTEKCIINLISKK
NISNLTQYLTSSEKRRLGITDTKDLSVDDLFKLSELQPPSNVMPHGNVGTPVKVFLNLVR
DCKLPPNIIKKLKLEFPSTASNKLYGNVGYKYQSSLSCEKPTNTENNETERDDDADSDDG
EEWERHEAFHDDVTSQERCKERLFEEDIELKWEKGGSGLVFYTDAQYWKEDVGDFDEETA
DDWDVDVSEYYHGDGDRDAKQIQLMRKEKRLREGAALKSGLKLSKTKVKKMGKFEEHTRG
FGRHIMEGLGWNDDVGLGRGGRRDPVEANGQVSRDGLGFKEPYRPAHRSGEPLASSSHFF
PQFRSNISRISKNRRFSGRNRKQAVPGTDGIVITTIYDEPLDVDLEPGLLRSAHSGAMKR
RRCLSPTIVPEPTPATTSSSISKLVNPPTRYTEELNEPPQDIKRTKQTQSLSSPMNNINL
IKFVKSSDR

Nucleotide sequence

Length: 1,969

>KH2012:KH.L22.20.v1.A.ND1-1
AATCTGGTATTCCCCCAAGTATTGAGAAATGTTTGCAAATAAAAACAAAGCGAGGTTTCT
GGTTAAAATACTAAATATAGTAATATACGTGTGTTTACTTGAGCACTGACTGTAACGAAT
GTGTATATGTTTAACTATCCATTGTAAAATCATTTTCGGACATTTAAAGAGTGTAAACAA
CTAAGTTAAAACGTTCTTTTAGAAAATAGGAACATGTAAAAAGATATATCATGGAAAGTA
GCTCTACGCCAGTGTTTGTCATTGTTCGAAACATACCGCTAAGTTATCGTTCCGCAGACT
TAAGACGATTCTTCTCAGACGCTGTCGAAAATGAAAGTTTTTCTTGTTTTCACTTCAAAC
ATAGACCTGAACATCGCCCACAAAAGCAACAAAAGAAAGATGTGAATACAGTTTCGATGA
AGGAAACTTCAACATTCGTTTGCATTGCTTCACTAAGAACTTGTGCCCAGCGTCATAACT
TTGTAACAAAATATAACAAGAAATATTGGGATGACAAAGAAGGGAATATGCTCACAGAAA
AATGTATAATCAACTTGATATCAAAGAAGAACATTTCAAACTTAACTCAATATTTAACCA
GCAGTGAAAAAAGGCGGCTTGGTATCACTGATACAAAAGATCTAAGTGTTGACGATTTAT
TCAAGTTGTCTGAGTTACAACCCCCTAGTAATGTAATGCCTCATGGAAATGTAGGAACGC
CAGTCAAAGTTTTTCTAAACTTAGTCAGGGATTGTAAACTTCCACCAAACATCATAAAGA
AATTGAAACTTGAGTTCCCTTCTACAGCAAGCAATAAACTTTATGGAAATGTTGGTTATA
AATATCAATCATCTTTATCATGTGAGAAACCTACAAACACTGAAAATAATGAGACAGAAA
GAGATGATGATGCAGATTCAGATGATGGGGAAGAGTGGGAGAGACACGAGGCTTTCCATG
ATGATGTTACTTCACAGGAAAGATGCAAAGAGCGTTTATTTGAAGAAGATATTGAATTGA
AATGGGAGAAGGGTGGAAGTGGTCTTGTGTTTTATACAGATGCTCAGTATTGGAAAGAGG
ATGTAGGAGATTTTGATGAGGAGACGGCTGATGATTGGGATGTTGATGTGAGTGAATATT
ATCATGGAGATGGAGATCGGGATGCAAAGCAGATCCAACTTATGAGGAAAGAGAAGAGGT
TAAGAGAAGGCGCAGCATTGAAAAGCGGGTTAAAACTTTCCAAAACAAAAGTTAAAAAGA
TGGGCAAGTTCGAAGAACACACGCGTGGATTCGGTCGTCATATAATGGAGGGGTTGGGAT
GGAACGATGATGTTGGGTTGGGTCGTGGGGGTAGACGAGACCCTGTTGAAGCAAATGGTC
AAGTTTCAAGAGATGGCTTAGGGTTTAAAGAGCCGTATAGACCCGCACATAGATCTGGTG
AACCCTTAGCTAGTTCCTCCCATTTTTTCCCGCAGTTTCGTAGCAATATTTCGAGGATTT
CAAAAAACAGACGTTTTTCGGGTAGAAATCGAAAACAGGCAGTGCCTGGTACAGACGGTA
TTGTTATAACTACGATATATGACGAACCACTAGATGTTGACCTTGAGCCGGGCCTTTTGC
GCTCTGCTCATTCGGGCGCGATGAAAAGACGACGCTGCTTGAGCCCAACCATTGTCCCTG
AACCAACACCAGCAACTACCTCGTCCAGTATTTCAAAACTTGTCAACCCACCCACCAGGT
ACACTGAAGAATTAAACGAACCACCTCAGGATATTAAAAGGACTAAACAAACACAATCAC
TCAGTTCACCGATGAACAACATTAATCTTATTAAATTTGTGAAGTCTTCCGACAGATAAC
GACCTGGGTTATTTATTTATAAACGTTTACTCTGCTAACTTAATTGTTGGACGTTCACAT
AAAACATCTTTTTGATAAGTTGCTTCCAGAGCGAAAAAAAATAATAAAA

InterProScan

SMART
G_patch_dom (IPR000467) - T[356-400] 0.0046
ProSiteProfiles
G_patch_dom (IPR000467) - T[358-402] 9.74

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GPTC3_HUMAN 37.782 % 303 1.38E-96