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  1. Transcript 'KH2012:KH.L22.28.v1....'

Transcript Model

Transcript Id

KH2012:KH.L22.28.v1.A.ND2-2

Possible name(s)

GABBR1

Location

KhL22 [551,013 / 562,995]

Sequences

Amino acid sequence

Length: 790

>KH.L22.28.v1.A.ND2-2
VVSFRMKYTIIWLLAAVLSSISLSVATTDIFVGGIFPMSGGWSGGQACYPAAQMAVEDVN
NRSDILQGYKINLVKKDSKCDAGLGTRKFYDLLQDSRIFTLLTGCSSVSTPIAESAYLWN
INVMAYGASSPALSNRSRFPSFFRTHPSANLHNPTRIKLFQMFGWKRIGIISQGSEVFES
TAKDLRTRLIQENMEIVTQQSFHADPKVAVQNLKKVDVRIIVGLFYEGAARKVMCEAFKE
KLFGNRYVWFLIGWYKHGWHIVPEKGVDCTEDEMADTVEGHFTTEILMLNPTNDTTVSGM
NTQEFLQRLSNTTTDIHLKGGYEEAPLAYDAIWAIAIALNNSIQRLQTSDLTRNNGLILN
DMYRSLNASSFTGISGTVVFDSDGSRMAWTKVERMENGVYKEILIYHAEKKIMKRINKIN
WKQPPKDRTMTVKRTLKLSTSAFVAGGAMAAMCGFFCVACLCFTWKERNNKLIIPPGSSL
NSISLFGFLLLISAIFLSGLNDITGPICEVRAWTLSIGFTLAFSPLFAKLWTVNDLHKKM
IFDGRSTKKKKKDVKVNFTLNTETVVVMVVPLVLDLIVLITWSCIDRLVQSKSKLAPYEE
GEVIINPELKKCVSNYTTIWIGVMFAYKAIQLLLGSFLAYESRSKIESNSDHKTVAGAVY
NITVLSLLCAPILMILGDEPNLSFLFLATPINMCTITSTAIIFIPKWRVSRKKPEFRRTG
SNRSAVQRVRPPASNHIESEEQKLERENRILQEKIAEKNKQINELRQRKIATENMSNGIQ
ELTPQGQDCE

Nucleotide sequence

Length: 2,455

>KH2012:KH.L22.28.v1.A.ND2-2
GTCGTAAGCTTTAGAATGAAGTATACAATAATTTGGTTGCTTGCTGCTGTTTTATCGAGT
ATCTCATTATCAGTTGCTACAACGGATATCTTTGTAGGTGGGATATTCCCAATGTCCGGC
GGTTGGTCTGGGGGGCAAGCATGTTATCCTGCTGCACAAATGGCTGTTGAAGATGTTAAC
AACAGATCTGATATTTTGCAAGGTTACAAAATTAATTTGGTCAAAAAGGACAGCAAGTGC
GATGCTGGGCTGGGTACTCGAAAGTTTTATGATTTACTTCAAGATTCAAGAATATTTACT
TTGCTTACTGGCTGCAGCAGCGTGTCCACACCGATTGCCGAGTCGGCGTATTTATGGAAT
ATTAACGTCATGGCTTACGGTGCAAGCTCTCCCGCTTTATCGAACAGGAGTCGTTTTCCC
TCCTTCTTCCGGACTCATCCATCCGCCAACCTCCACAATCCAACAAGGATCAAACTCTTC
CAAATGTTTGGATGGAAGAGAATCGGGATTATTAGTCAAGGATCAGAAGTTTTTGAATCC
ACCGCTAAAGACTTACGCACTCGTTTGATCCAAGAAAATATGGAAATTGTAACGCAGCAA
TCTTTTCATGCAGACCCGAAAGTTGCAGTACAGAATTTGAAGAAAGTCGACGTTCGAATT
ATCGTTGGTCTCTTTTACGAAGGAGCCGCACGTAAAGTGATGTGTGAGGCGTTCAAGGAA
AAATTATTCGGGAATCGGTATGTGTGGTTTCTAATAGGTTGGTACAAACATGGTTGGCAT
ATAGTTCCTGAAAAAGGTGTTGATTGCACTGAAGATGAAATGGCAGATACAGTTGAAGGA
CATTTTACTACAGAAATACTGATGCTCAATCCAACTAATGATACAACTGTTTCCGGCATG
AACACTCAAGAATTTCTGCAAAGGCTGTCTAACACCACAACTGACATTCACTTAAAAGGT
GGATATGAAGAAGCTCCACTTGCATATGATGCAATATGGGCCATTGCTATTGCACTTAAC
AACTCCATTCAACGGCTACAAACGTCTGATCTGACAAGAAATAACGGATTAATTTTAAAC
GACATGTACCGTTCATTAAATGCTTCATCATTCACTGGAATATCAGGAACAGTTGTGTTT
GATTCTGATGGCTCAAGAATGGCGTGGACAAAAGTTGAACGAATGGAAAATGGAGTTTAC
AAGGAGATACTTATCTATCATGCTGAGAAAAAGATAATGAAAAGAATTAATAAGATAAAT
TGGAAACAACCACCTAAAGATCGCACAATGACAGTGAAAAGAACTTTGAAATTGTCAACC
TCTGCTTTTGTGGCTGGAGGTGCCATGGCAGCAATGTGTGGCTTCTTCTGTGTGGCATGC
CTCTGTTTCACTTGGAAAGAAAGAAATAACAAACTAATAATACCTCCTGGGTCTTCATTG
AACTCAATAAGTTTGTTTGGATTTCTTCTCCTTATATCGGCAATATTTCTGTCTGGACTC
AATGATATCACAGGACCTATTTGTGAGGTACGAGCATGGACTCTTTCCATTGGTTTTACT
CTTGCCTTCTCCCCTCTATTTGCCAAACTATGGACCGTAAATGATCTTCATAAAAAAATG
ATCTTTGATGGGAGAAGTACAAAGAAAAAAAAGAAAGATGTAAAAGTGAACTTCACACTA
AACACAGAGACAGTTGTTGTGATGGTAGTGCCTCTAGTGTTGGATCTCATCGTGCTAATC
ACATGGTCTTGTATTGACCGCCTTGTTCAATCAAAATCAAAGCTTGCTCCATATGAAGAA
GGAGAAGTTATCATTAATCCAGAGTTAAAGAAATGTGTTTCTAATTACACAACAATATGG
ATTGGTGTAATGTTTGCTTATAAGGCAATTCAGTTATTACTTGGTTCATTCCTTGCTTAT
GAAAGTCGAAGTAAGATTGAAAGTAACAGTGACCACAAGACTGTAGCTGGTGCTGTGTAC
AACATAACGGTCCTCAGTCTTCTGTGTGCTCCAATCCTCATGATCTTAGGTGATGAACCA
AATCTTTCCTTTCTTTTCCTTGCAACTCCTATCAATATGTGTACCATCACAAGCACTGCT
ATTATATTTATTCCAAAGTGGAGAGTATCTCGCAAGAAGCCAGAATTCAGACGAACAGGT
TCAAATCGTTCTGCAGTTCAACGAGTACGACCACCTGCCAGCAACCATATTGAGTCAGAG
GAACAAAAACTGGAACGTGAAAATCGAATTCTTCAGGAAAAAATTGCAGAAAAAAACAAA
CAGATAAATGAACTTCGTCAAAGAAAAATTGCAACAGAGAACATGAGCAATGGGATACAA
GAACTCACACCACAAGGCCAGGACTGTGAATAAAATTTTCCAAAAATTGTTGTTGTTATA
TATTGTTGTAAACAAAAACTGTGAGACTGTTTCGTAATAAATGTTGTTTCGAGAA

InterProScan

SUPERFAMILY
Peripla_BP_I (IPR028082) - T[29-424] 1.08E-67
PANTHER
GPCR3_GABA-B (IPR002455) - T[32-776] 8.5E-233
Pfam
ANF_lig-bd_rcpt (IPR001828) - T[48-395] 9.9E-56
ProSiteProfiles
GPCR_3_C (IPR017978) - T[443-715] 16.422
Pfam
GPCR_3_C (IPR017978) - T[455-708] 9.9E-41

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GABR2_HUMAN 29.587 % 363 3.37E-112
GABR1_HUMAN 41.419 % 604 0





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