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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C5.66.v5.A...'
  2. Transcript 'Cisavi.CG.ENS81.R30....'
  3. Clone 'cima822343'
  4. Transcript 'KH2012:KH.L22.28.v2....'

Transcript Model

Transcript Id

KH2012:KH.L22.28.v2.A.ND1-1

Possible name(s)

GABBR1

Location

KhL22 [550,982 / 555,344]

Sequences

Amino acid sequence

Length: 315

>KH.L22.28.v2.A.ND1-1
VVVRLCKVVSFRMKYTIIWLLAAVLSSISLSVATTDIFVGGIFPMSGGWSGGQACYPAAQ
MAVEDVNNRSDILQGYKINLVKKDSKCDAGLGTRKFYDLLQDSRIFTLLTGCSSVSTPIA
ESAYLWNINVMAYGASSPALSNRSRFPSFFRTHPSANLHNPTRIKLFQMFGWKRIGIISQ
GSEVFESTAKDLRTRLIQENMEIVTQQSFHADPKVAVQNLKKVDVRIIVGLFYEGAARKV
MCEAFKEKLFGNRYVWFLIGWYKHGWHKVPEKGVDCTEDEMADTVEGHFTTEILMLNPTN
DTTVSGMVRFLQLKV

Nucleotide sequence

Length: 1,002

>KH2012:KH.L22.28.v2.A.ND1-1
TAGGCTTTAAGTAGTTGTAAGGTTATGTAAAGTCGTAAGCTTTAGAATGAAGTATACAAT
AATTTGGTTGCTTGCTGCTGTTTTATCGAGTATCTCATTATCAGTTGCTACAACGGATAT
CTTTGTAGGTGGGATATTCCCAATGTCCGGCGGTTGGTCTGGGGGGCAAGCATGTTATCC
TGCTGCACAAATGGCTGTTGAAGATGTTAACAACAGATCTGATATTTTGCAAGGTTACAA
AATTAATTTGGTCAAAAAGGACAGCAAGTGCGATGCTGGGCTGGGTACTCGAAAGTTTTA
TGATTTACTTCAAGATTCAAGAATATTTACTTTGCTTACTGGCTGCAGCAGCGTGTCCAC
ACCGATTGCCGAGTCGGCGTATTTATGGAATATTAACGTCATGGCTTACGGTGCAAGCTC
TCCCGCTTTATCGAACAGGAGTCGTTTTCCCTCCTTCTTCCGGACTCATCCATCCGCCAA
CCTCCACAATCCAACAAGGATCAAACTCTTCCAAATGTTTGGATGGAAGAGAATCGGGAT
TATTAGTCAAGGATCAGAAGTTTTTGAATCCACCGCTAAAGACTTACGCACTCGTTTGAT
CCAAGAAAATATGGAAATTGTAACGCAGCAATCTTTTCATGCAGACCCGAAAGTTGCAGT
ACAGAATTTGAAGAAAGTCGACGTTCGAATTATCGTTGGTCTCTTTTACGAAGGAGCCGC
ACGTAAAGTGATGTGTGAGGCATTCAAGGAAAAATTATTCGGGAACCGGTATGTGTGGTT
TCTAATAGGTTGGTACAAACATGGTTGGCATAAAGTTCCTGAAAAAGGTGTTGATTGCAC
TGAAGATGAAATGGCAGATACAGTTGAAGGACATTTTACTACAGAGATACTGATGCTTAA
TCCAACTAACGATACAACTGTTTCCGGCATGGTGAGGTTCCTACAGTTGAAAGTGTAAAT
AGTTAAGCGCAGAGGTGCAGAAATACAAGTATTGAAAGAATG

InterProScan

SUPERFAMILY
Peripla_BP_I (IPR028082) - T[36-296] 9.42E-54
PANTHER
GPCR3_GABA-B (IPR002455) - T[39-313] 2.9E-109
Pfam
ANF_lig-bd_rcpt (IPR001828) - T[55-308] 2.1E-43

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GABR2_HUMAN 32.971 % 172 3.95E-48
GABR1_HUMAN 58.608 % 357 1.66E-116