Aniseed - Transcript Card

Transcript 'Haaura.CG.MTP2014.S9...' >
Transcript 'KH2012:KH.L30.5.v1.C...'

Transcript Model

Transcript Id

KH2012:KH.L30.5.v1.C.nonSL17-1

Possible name(s)

QTRT1; QTRT2

Gene model

KH2012:KH.L30.5

Location

KhL30 [17,877 / 19,373]

Sequences

Amino acid sequence

Length: 352

>KH.L30.5.v1.C.nonSL17-1
GTLKGLIPEQLENIGIQIILGNTYHLGHQPGEEILKQAGGLHQFMGWRRALLTDSGGFQM
VSLIKLSELSEEGVKFVHPRDGAEMLLTPEKSMAIQNAIGADIMMQLDDVVTSTETNQER
FKEATARSVRWLDRCISAHKRTDQFLFPIIQGGLDEELRKQCLHEMTARPVPGFAVGGLS
GGECKDDFWKMVTVSTDGLPKDKPRYLMGVGYAADLIMCVALGCDMFDCVFPTRTARFGS
ALVPTGQLQLKNVSYATDMSPIQNDCTCTTCRTYTRAYLHLLFRTSHPSACHMVTVHNLM
YQFTLMRKIREAISEDKFPEFIKTSYLQLFGNPSKYPSWAVDAFASVGVNLK

Nucleotide sequence

Length: 1,496

>KH2012:KH.L30.5.v1.C.nonSL17-1
AGGGTACATTAAAGGGACTTATACCAGAACAACTAGAAAACATAGGGATACAAATAATCT
TAGGAAATACATACCACCTTGGGCATCAACCTGGGGAAGAAATATTGAAACAAGCTGGGG
GGTTGCATCAATTTATGGGCTGGAGGCGAGCCCTACTGACCGACAGTGGTGGGTTCCAAA
TGGTGTCTTTAATTAAACTATCTGAACTATCAGAGGAAGGGGTAAAGTTTGTACATCCTC
GCGATGGTGCGGAAATGTTGTTAACGCCAGAGAAATCTATGGCGATACAAAACGCGATCG
GTGCCGATATAATGATGCAGCTTGATGATGTTGTGACAAGCACTGAGACAAACCAAGAGA
GATTTAAAGAAGCAACAGCGCGATCTGTAAGGTGGCTAGATAGATGTATATCCGCGCATA
AACGAACCGATCAATTCCTTTTCCCGATTATTCAAGGGGGTTTGGACGAAGAATTAAGAA
AGCAATGTCTGCATGAGATGACTGCGCGACCGGTGCCCGGATTCGCTGTTGGTGGGTTGA
GTGGGGGAGAATGTAAAGATGATTTTTGGAAGATGGTTACTGTCAGTACTGATGGATTAC
CTAAAGATAAACCAAGATACTTAATGGGCGTTGGTTATGCTGCTGATCTTATAATGTGCG
TCGCACTTGGTTGTGACATGTTTGACTGTGTATTTCCAACTAGAACTGCTAGATTTGGGT
CTGCTTTGGTTCCTACTGGACAATTACAATTAAAAAACGTATCATACGCCACAGATATGT
CACCAATTCAAAATGATTGTACATGTACAACATGTAGAACTTACACAAGGGCTTATCTTC
ACTTATTATTCCGGACGAGCCACCCTAGTGCTTGCCATATGGTCACAGTGCACAACTTAA
TGTACCAATTTACACTGATGCGTAAAATAAGAGAAGCAATATCTGAGGACAAATTCCCTG
AGTTTATAAAAACATCGTACTTACAATTATTTGGTAACCCATCAAAATATCCGAGCTGGG
CAGTGGACGCGTTTGCCTCAGTTGGTGTCAATTTAAAATAAACTTCTATCTTTTCCAACT
TCACATTTGGTTTGTTATGGGTGCCTTAGATTCTCTTTTATTTAAACTGCTGCATCAGAA
TTCTATTCAACACGAGGGGATTGTTACATTGTAGTTCTGCAATATTGTATCTTCATTTAT
TTCTTGCTAGTTAAAAGTATCCAAATTTTTCTTATATTTAAACTGCCAATTCGTGATACA
TTAAATTGCTGTGTGGATTTCTATGTCTCTCTCTTGCTGCTATTTTCACTCAGTTTCCCA
ATACATTGATACCAGTAATTTAAAGACAGCCTTTCAGAAAGTGGTGCAATTTTGCCCTCG
TCATTTGAACATTTTTTACATTGCTGTCATATAGCCTGTCAAGAACATTTTGTCTGAGAC
GTTATATCTCAGTGAGACAGCAAATATAAAACATGTCAATTTTCACTAAGTTGTTT

InterProScan

TIGRFAM	tRNA_ribo_trans-like (IPR002616) - T[1-325] 1.3E-115
TIGRFAM	TGT (IPR004803) - T[1-326] 4.6E-118
Gene3D	TGT-like_sf (IPR036511) - T[1-332] 1.7E-140
SUPERFAMILY	TGT-like_sf (IPR036511) - T[1-324] 1.57E-124
Pfam	tRNA_ribo_trans-like (IPR002616) - T[91-323] 2.3E-88

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TGT_HUMAN	61.364 %	461	3.27E-163