Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L30.5.v1.C.nonSL18-1

Possible name(s)

QTRT1; QTRT2

Gene model

KH2012:KH.L30.5

Location

KhL30 [17,877 / 19,329]

Sequences

Amino acid sequence

Length: 338

>KH.L30.5.v1.C.nonSL18-1
GIQIILGNTYHLGHQPGEEILKQAGGLHQFMGWRRALLTDSGGFQMVSLIKLSELSEEGV
KFVHPRDGAEMLLTPEKSMAIQNAIGADIMMQLDDVVTSTETNQERFKEATARSVRWLDR
CISAHKRTDQFLFPIIQGGLDEELRKQCLHEMTARPVPGFAVGGLSGGECKDDFWKMVTV
STDGLPKDKPRYLMGVGYAADLIMCVALGCDMFDCVFPTRTARFGSALVPTGQLQLKNVS
YATDMSPIQNDCTCTTCRTYTRAYLHLLFRTSHPSACHMVTVHNLMYQFTLMRKIREAIS
EDKFPEFIKTSYLQLFGNPSKYPSWAVDAFASVGVNLK

Nucleotide sequence

Length: 1,452

>KH2012:KH.L30.5.v1.C.nonSL18-1
GGGATACAAATAATCTTAGGAAATACATACCACCTTGGGCATCAACCTGGGGAAGAAATA
TTGAAACAAGCTGGGGGGTTGCATCAATTTATGGGCTGGAGGCGAGCCCTACTGACCGAC
AGTGGTGGGTTCCAAATGGTGTCTTTAATTAAACTATCTGAACTATCAGAGGAAGGGGTA
AAGTTTGTACATCCTCGCGATGGTGCGGAAATGTTGTTAACGCCAGAGAAATCTATGGCG
ATACAAAACGCGATCGGTGCCGATATAATGATGCAGCTTGATGATGTTGTGACAAGCACT
GAGACAAACCAAGAGAGATTTAAAGAAGCAACAGCGCGATCTGTAAGGTGGCTAGATAGA
TGTATATCCGCGCATAAACGAACCGATCAATTCCTTTTCCCGATTATTCAAGGGGGTTTG
GACGAAGAATTAAGAAAGCAATGTCTGCATGAGATGACTGCGCGACCGGTGCCCGGATTC
GCTGTTGGTGGGTTGAGTGGGGGAGAATGTAAAGATGATTTTTGGAAGATGGTTACTGTC
AGTACTGATGGATTACCTAAAGATAAACCAAGATACTTAATGGGCGTTGGTTATGCTGCT
GATCTTATAATGTGCGTCGCACTTGGTTGTGACATGTTTGACTGTGTATTTCCAACTAGA
ACTGCTAGATTTGGGTCTGCTTTGGTTCCTACTGGACAATTACAATTAAAAAACGTATCA
TACGCCACAGATATGTCACCAATTCAAAATGATTGTACATGTACAACATGTAGAACTTAC
ACAAGGGCTTATCTTCACTTATTATTCCGGACGAGCCACCCTAGTGCTTGCCATATGGTC
ACAGTGCACAACTTAATGTACCAATTTACACTGATGCGTAAAATAAGAGAAGCAATATCT
GAGGACAAATTCCCTGAGTTTATAAAAACATCGTACTTACAATTATTTGGTAACCCATCA
AAATATCCGAGCTGGGCAGTGGACGCGTTTGCCTCAGTTGGTGTCAATTTAAAATAAACT
TCTATCTTTTCCAACTTCACATTTGGTTTGTTATGGGTGCCTTAGATTCTCTTTTATTTA
AACTGCTGCATCAGAATTCTATTCAACACGAGGGGATTGTTACATTGTAGTTCTGCAATA
TTGTATCTTCATTTATTTCTTGCTAGTTAAAAGTATCCAAATTTTTCTTATATTTAAACT
GCCAATTCGTGATACATTAAATTGCTGTGTGGATTTCTATGTCTCTCTCTTGCTGCTATT
TTCACTCAGTTTCCCAATACATTGATACCAGTAATTTAAAGACAGCCTTTCAGAAAGTGG
TGCAATTTTGCCCTCGTCATTTGAACATTTTTTACATTGCTGTCATATAGCCTGTCAAGA
ACATTTTGTCTGAGACGTTATATCTCAGTGAGACAGCAAATATAAAACATGTCAATTTTC
ACTAAGTTGTTT

InterProScan

Gene3D	TGT-like_sf (IPR036511) - T[1-318] 1.3E-135
SUPERFAMILY	TGT-like_sf (IPR036511) - T[1-310] 1.01E-119
TIGRFAM	tRNA_ribo_trans-like (IPR002616) - T[2-311] 8.6E-112
TIGRFAM	TGT (IPR004803) - T[2-312] 1.1E-113
Pfam	tRNA_ribo_trans-like (IPR002616) - T[77-309] 2.0E-88

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TGT_HUMAN	62.13 %	449	1.86E-158