Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L30.5.v1.C.nonSL3-1

Possible name(s)

QTRT1; QTRT2

Gene model

KH2012:KH.L30.5

Location

KhL30 [17,877 / 19,355]

Sequences

Amino acid sequence

Length: 346

>KH.L30.5.v1.C.nonSL3-1
IPEQLENIGIQIILGNTYHLGHQPGEEILKQAGGLHQFMGWRRALLTDSGGFQMVSLIKL
SELSEEGVKFVHPRDGAEMLLTPEKSMAIQNAIGADIMMQLDDVVTSTETNQERFKEATA
RSVRWLDRCISAHKRTDQFLFPIIQGGLDEELRKQCLHEMTARPVPGFAVGGLSGGECKD
DFWKMVTVSTDGLPKDKPRYLMGVGYAADLIMCVALGCDMFDCVFPTRTARFGSALVPTG
QLQLKNVSYATDMSPIQNDCTCTTCRTYTRAYLHLLFRTSHPSACHMVTVHNLMYQFTLM
RKIREAISEDKFPEFIKTSYLQLFGNPSKYPSWAVDAFASVGVNLK

Nucleotide sequence

Length: 1,478

>KH2012:KH.L30.5.v1.C.nonSL3-1
TTATACCAGAACAACTAGAAAACATAGGGATACAAATAATCTTAGGAAATACATACCACC
TTGGGCATCAACCTGGGGAAGAAATATTGAAACAAGCTGGGGGGTTGCATCAATTTATGG
GCTGGAGGCGAGCCCTACTGACCGACAGTGGTGGGTTCCAAATGGTGTCTTTAATTAAAC
TATCTGAACTATCAGAGGAAGGGGTAAAGTTTGTACATCCTCGCGATGGTGCGGAAATGT
TGTTAACGCCAGAGAAATCTATGGCGATACAAAACGCGATCGGTGCCGATATAATGATGC
AGCTTGATGATGTTGTGACAAGCACTGAGACAAACCAAGAGAGATTTAAAGAAGCAACAG
CGCGATCTGTAAGGTGGCTAGATAGATGTATATCCGCGCATAAACGAACCGATCAATTCC
TTTTCCCGATTATTCAAGGGGGTTTGGACGAAGAATTAAGAAAGCAATGTCTGCATGAGA
TGACTGCGCGACCGGTGCCCGGATTCGCTGTTGGTGGGTTGAGTGGGGGAGAATGTAAAG
ATGATTTTTGGAAGATGGTTACTGTCAGTACTGATGGATTACCTAAAGATAAACCAAGAT
ACTTAATGGGCGTTGGTTATGCTGCTGATCTTATAATGTGCGTCGCACTTGGTTGTGACA
TGTTTGACTGTGTATTTCCAACTAGAACTGCTAGATTTGGGTCTGCTTTGGTTCCTACTG
GACAATTACAATTAAAAAACGTATCATACGCCACAGATATGTCACCAATTCAAAATGATT
GTACATGTACAACATGTAGAACTTACACAAGGGCTTATCTTCACTTATTATTCCGGACGA
GCCACCCTAGTGCTTGCCATATGGTCACAGTGCACAACTTAATGTACCAATTTACACTGA
TGCGTAAAATAAGAGAAGCAATATCTGAGGACAAATTCCCTGAGTTTATAAAAACATCGT
ACTTACAATTATTTGGTAACCCATCAAAATATCCGAGCTGGGCAGTGGACGCGTTTGCCT
CAGTTGGTGTCAATTTAAAATAAACTTCTATCTTTTCCAACTTCACATTTGGTTTGTTAT
GGGTGCCTTAGATTCTCTTTTATTTAAACTGCTGCATCAGAATTCTATTCAACACGAGGG
GATTGTTACATTGTAGTTCTGCAATATTGTATCTTCATTTATTTCTTGCTAGTTAAAAGT
ATCCAAATTTTTCTTATATTTAAACTGCCAATTCGTGATACATTAAATTGCTGTGTGGAT
TTCTATGTCTCTCTCTTGCTGCTATTTTCACTCAGTTTCCCAATACATTGATACCAGTAA
TTTAAAGACAGCCTTTCAGAAAGTGGTGCAATTTTGCCCTCGTCATTTGAACATTTTTTA
CATTGCTGTCATATAGCCTGTCAAGAACATTTTGTCTGAGACGTTATATCTCAGTGAGAC
AGCAAATATAAAACATGTCAATTTTCACTAAGTTGTTT

InterProScan

Gene3D	TGT-like_sf (IPR036511) - T[1-326] 1.8E-138
SUPERFAMILY	TGT-like_sf (IPR036511) - T[2-318] 1.96E-122
TIGRFAM	TGT (IPR004803) - T[2-320] 1.1E-115
TIGRFAM	tRNA_ribo_trans-like (IPR002616) - T[2-319] 1.0E-113
Pfam	tRNA_ribo_trans-like (IPR002616) - T[85-317] 2.2E-88

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TGT_HUMAN	61.919 %	455	6.77E-161