Aniseed - Transcript Card

Region 'REG00000374' >
Transcript 'KH2012:KH.L30.5.v1.C...'

Transcript Model

Transcript Id

KH2012:KH.L30.5.v1.C.nonSL4-1

Possible name(s)

QTRT1; QTRT2

Gene model

KH2012:KH.L30.5

Location

KhL30 [17,877 / 19,339]

Sequences

Amino acid sequence

Length: 341

>KH.L30.5.v1.C.nonSL4-1
ENIGIQIILGNTYHLGHQPGEEILKQAGGLHQFMGWRRALLTDSGGFQMVSLIKLSELSE
EGVKFVHPRDGAEMLLTPEKSMAIQNAIGADIMMQLDDVVTSTETNQERFKEATARSVRW
LDRCISAHKRTDQFLFPIIQGGLDEELRKQCLHEMTARPVPGFAVGGLSGGECKDDFWKM
VTVSTDGLPKDKPRYLMGVGYAADLIMCVALGCDMFDCVFPTRTARFGSALVPTGQLQLK
NVSYATDMSPIQNDCTCTTCRTYTRAYLHLLFRTSHPSACHMVTVHNLMYQFTLMRKIRE
AISEDKFPEFIKTSYLQLFGNPSKYPSWAVDAFASVGVNLK

Nucleotide sequence

Length: 1,462

>KH2012:KH.L30.5.v1.C.nonSL4-1
AGAAAACATAGGGATACAAATAATCTTAGGAAATACATACCACCTTGGGCATCAACCTGG
GGAAGAAATATTGAAACAAGCTGGGGGGTTGCATCAATTTATGGGCTGGAGGCGAGCCCT
ACTGACCGACAGTGGTGGGTTCCAAATGGTGTCTTTAATTAAACTATCTGAACTATCAGA
GGAAGGGGTAAAGTTTGTACATCCTCGCGATGGTGCGGAAATGTTGTTAACGCCAGAGAA
ATCTATGGCGATACAAAACGCGATCGGTGCCGATATAATGATGCAGCTTGATGATGTTGT
GACAAGCACTGAGACAAACCAAGAGAGATTTAAAGAAGCAACAGCGCGATCTGTAAGGTG
GCTAGATAGATGTATATCCGCGCATAAACGAACCGATCAATTCCTTTTCCCGATTATTCA
AGGGGGTTTGGACGAAGAATTAAGAAAGCAATGTCTGCATGAGATGACTGCGCGACCGGT
GCCCGGATTCGCTGTTGGTGGGTTGAGTGGGGGAGAATGTAAAGATGATTTTTGGAAGAT
GGTTACTGTCAGTACTGATGGATTACCTAAAGATAAACCAAGATACTTAATGGGCGTTGG
TTATGCTGCTGATCTTATAATGTGCGTCGCACTTGGTTGTGACATGTTTGACTGTGTATT
TCCAACTAGAACTGCTAGATTTGGGTCTGCTTTGGTTCCTACTGGACAATTACAATTAAA
AAACGTATCATACGCCACAGATATGTCACCAATTCAAAATGATTGTACATGTACAACATG
TAGAACTTACACAAGGGCTTATCTTCACTTATTATTCCGGACGAGCCACCCTAGTGCTTG
CCATATGGTCACAGTGCACAACTTAATGTACCAATTTACACTGATGCGTAAAATAAGAGA
AGCAATATCTGAGGACAAATTCCCTGAGTTTATAAAAACATCGTACTTACAATTATTTGG
TAACCCATCAAAATATCCGAGCTGGGCAGTGGACGCGTTTGCCTCAGTTGGTGTCAATTT
AAAATAAACTTCTATCTTTTCCAACTTCACATTTGGTTTGTTATGGGTGCCTTAGATTCT
CTTTTATTTAAACTGCTGCATCAGAATTCTATTCAACACGAGGGGATTGTTACATTGTAG
TTCTGCAATATTGTATCTTCATTTATTTCTTGCTAGTTAAAAGTATCCAAATTTTTCTTA
TATTTAAACTGCCAATTCGTGATACATTAAATTGCTGTGTGGATTTCTATGTCTCTCTCT
TGCTGCTATTTTCACTCAGTTTCCCAATACATTGATACCAGTAATTTAAAGACAGCCTTT
CAGAAAGTGGTGCAATTTTGCCCTCGTCATTTGAACATTTTTTACATTGCTGTCATATAG
CCTGTCAAGAACATTTTGTCTGAGACGTTATATCTCAGTGAGACAGCAAATATAAAACAT
GTCAATTTTCACTAAGTTGTTT

InterProScan

Gene3D	TGT-like_sf (IPR036511) - T[1-321] 1.6E-136
SUPERFAMILY	TGT-like_sf (IPR036511) - T[2-313] 1.09E-120
TIGRFAM	TGT (IPR004803) - T[2-315] 2.3E-114
TIGRFAM	tRNA_ribo_trans-like (IPR002616) - T[2-314] 1.8E-112
Pfam	tRNA_ribo_trans-like (IPR002616) - T[80-312] 2.1E-88

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TGT_HUMAN	61.584 %	449	1.16E-158