Aniseed - Transcript Card

Transcript 'KH2012:KH.L4.55.v1.A...' >
Transcript 'KH2012:KH.L30.5.v1.C...'

Transcript Model

Transcript Id

KH2012:KH.L30.5.v1.C.nonSL8-1

Possible name(s)

QTRT1; QTRT2

Gene model

KH2012:KH.L30.5

Location

KhL30 [17,877 / 19,366]

Sequences

Amino acid sequence

Length: 350

>KH.L30.5.v1.C.nonSL8-1
LKGLIPEQLENIGIQIILGNTYHLGHQPGEEILKQAGGLHQFMGWRRALLTDSGGFQMVS
LIKLSELSEEGVKFVHPRDGAEMLLTPEKSMAIQNAIGADIMMQLDDVVTSTETNQERFK
EATARSVRWLDRCISAHKRTDQFLFPIIQGGLDEELRKQCLHEMTARPVPGFAVGGLSGG
ECKDDFWKMVTVSTDGLPKDKPRYLMGVGYAADLIMCVALGCDMFDCVFPTRTARFGSAL
VPTGQLQLKNVSYATDMSPIQNDCTCTTCRTYTRAYLHLLFRTSHPSACHMVTVHNLMYQ
FTLMRKIREAISEDKFPEFIKTSYLQLFGNPSKYPSWAVDAFASVGVNLK

Nucleotide sequence

Length: 1,489

>KH2012:KH.L30.5.v1.C.nonSL8-1
ATTAAAGGGACTTATACCAGAACAACTAGAAAACATAGGGATACAAATAATCTTAGGAAA
TACATACCACCTTGGGCATCAACCTGGGGAAGAAATATTGAAACAAGCTGGGGGGTTGCA
TCAATTTATGGGCTGGAGGCGAGCCCTACTGACCGACAGTGGTGGGTTCCAAATGGTGTC
TTTAATTAAACTATCTGAACTATCAGAGGAAGGGGTAAAGTTTGTACATCCTCGCGATGG
TGCGGAAATGTTGTTAACGCCAGAGAAATCTATGGCGATACAAAACGCGATCGGTGCCGA
TATAATGATGCAGCTTGATGATGTTGTGACAAGCACTGAGACAAACCAAGAGAGATTTAA
AGAAGCAACAGCGCGATCTGTAAGGTGGCTAGATAGATGTATATCCGCGCATAAACGAAC
CGATCAATTCCTTTTCCCGATTATTCAAGGGGGTTTGGACGAAGAATTAAGAAAGCAATG
TCTGCATGAGATGACTGCGCGACCGGTGCCCGGATTCGCTGTTGGTGGGTTGAGTGGGGG
AGAATGTAAAGATGATTTTTGGAAGATGGTTACTGTCAGTACTGATGGATTACCTAAAGA
TAAACCAAGATACTTAATGGGCGTTGGTTATGCTGCTGATCTTATAATGTGCGTCGCACT
TGGTTGTGACATGTTTGACTGTGTATTTCCAACTAGAACTGCTAGATTTGGGTCTGCTTT
GGTTCCTACTGGACAATTACAATTAAAAAACGTATCATACGCCACAGATATGTCACCAAT
TCAAAATGATTGTACATGTACAACATGTAGAACTTACACAAGGGCTTATCTTCACTTATT
ATTCCGGACGAGCCACCCTAGTGCTTGCCATATGGTCACAGTGCACAACTTAATGTACCA
ATTTACACTGATGCGTAAAATAAGAGAAGCAATATCTGAGGACAAATTCCCTGAGTTTAT
AAAAACATCGTACTTACAATTATTTGGTAACCCATCAAAATATCCGAGCTGGGCAGTGGA
CGCGTTTGCCTCAGTTGGTGTCAATTTAAAATAAACTTCTATCTTTTCCAACTTCACATT
TGGTTTGTTATGGGTGCCTTAGATTCTCTTTTATTTAAACTGCTGCATCAGAATTCTATT
CAACACGAGGGGATTGTTACATTGTAGTTCTGCAATATTGTATCTTCATTTATTTCTTGC
TAGTTAAAAGTATCCAAATTTTTCTTATATTTAAACTGCCAATTCGTGATACATTAAATT
GCTGTGTGGATTTCTATGTCTCTCTCTTGCTGCTATTTTCACTCAGTTTCCCAATACATT
GATACCAGTAATTTAAAGACAGCCTTTCAGAAAGTGGTGCAATTTTGCCCTCGTCATTTG
AACATTTTTTACATTGCTGTCATATAGCCTGTCAAGAACATTTTGTCTGAGACGTTATAT
CTCAGTGAGACAGCAAATATAAAACATGTCAATTTTCACTAAGTTGTTT

InterProScan

Gene3D	TGT-like_sf (IPR036511) - T[1-330] 1.0E-139
TIGRFAM	TGT (IPR004803) - T[1-324] 3.7E-117
TIGRFAM	tRNA_ribo_trans-like (IPR002616) - T[2-323] 6.2E-115
SUPERFAMILY	TGT-like_sf (IPR036511) - T[2-322] 1.31E-123
Pfam	tRNA_ribo_trans-like (IPR002616) - T[89-321] 2.3E-88

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TGT_HUMAN	61.429 %	460	1.31E-162