Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L30.5.v1.C.SL10-1

Possible name(s)

QTRT1; QTRT2

Gene model

KH2012:KH.L30.5

Location

KhL30 [17,877 / 19,346]

Sequences

Amino acid sequence

Length: 343

>KH.L30.5.v1.C.SL10-1
QLENIGIQIILGNTYHLGHQPGEEILKQAGGLHQFMGWRRALLTDSGGFQMVSLIKLSEL
SEEGVKFVHPRDGAEMLLTPEKSMAIQNAIGADIMMQLDDVVTSTETNQERFKEATARSV
RWLDRCISAHKRTDQFLFPIIQGGLDEELRKQCLHEMTARPVPGFAVGGLSGGECKDDFW
KMVTVSTDGLPKDKPRYLMGVGYAADLIMCVALGCDMFDCVFPTRTARFGSALVPTGQLQ
LKNVSYATDMSPIQNDCTCTTCRTYTRAYLHLLFRTSHPSACHMVTVHNLMYQFTLMRKI
REAISEDKFPEFIKTSYLQLFGNPSKYPSWAVDAFASVGVNLK

Nucleotide sequence

Length: 1,469

>KH2012:KH.L30.5.v1.C.SL10-1
AACAACTAGAAAACATAGGGATACAAATAATCTTAGGAAATACATACCACCTTGGGCATC
AACCTGGGGAAGAAATATTGAAACAAGCTGGGGGGTTGCATCAATTTATGGGCTGGAGGC
GAGCCCTACTGACCGACAGTGGTGGGTTCCAAATGGTGTCTTTAATTAAACTATCTGAAC
TATCAGAGGAAGGGGTAAAGTTTGTACATCCTCGCGATGGTGCGGAAATGTTGTTAACGC
CAGAGAAATCTATGGCGATACAAAACGCGATCGGTGCCGATATAATGATGCAGCTTGATG
ATGTTGTGACAAGCACTGAGACAAACCAAGAGAGATTTAAAGAAGCAACAGCGCGATCTG
TAAGGTGGCTAGATAGATGTATATCCGCGCATAAACGAACCGATCAATTCCTTTTCCCGA
TTATTCAAGGGGGTTTGGACGAAGAATTAAGAAAGCAATGTCTGCATGAGATGACTGCGC
GACCGGTGCCCGGATTCGCTGTTGGTGGGTTGAGTGGGGGAGAATGTAAAGATGATTTTT
GGAAGATGGTTACTGTCAGTACTGATGGATTACCTAAAGATAAACCAAGATACTTAATGG
GCGTTGGTTATGCTGCTGATCTTATAATGTGCGTCGCACTTGGTTGTGACATGTTTGACT
GTGTATTTCCAACTAGAACTGCTAGATTTGGGTCTGCTTTGGTTCCTACTGGACAATTAC
AATTAAAAAACGTATCATACGCCACAGATATGTCACCAATTCAAAATGATTGTACATGTA
CAACATGTAGAACTTACACAAGGGCTTATCTTCACTTATTATTCCGGACGAGCCACCCTA
GTGCTTGCCATATGGTCACAGTGCACAACTTAATGTACCAATTTACACTGATGCGTAAAA
TAAGAGAAGCAATATCTGAGGACAAATTCCCTGAGTTTATAAAAACATCGTACTTACAAT
TATTTGGTAACCCATCAAAATATCCGAGCTGGGCAGTGGACGCGTTTGCCTCAGTTGGTG
TCAATTTAAAATAAACTTCTATCTTTTCCAACTTCACATTTGGTTTGTTATGGGTGCCTT
AGATTCTCTTTTATTTAAACTGCTGCATCAGAATTCTATTCAACACGAGGGGATTGTTAC
ATTGTAGTTCTGCAATATTGTATCTTCATTTATTTCTTGCTAGTTAAAAGTATCCAAATT
TTTCTTATATTTAAACTGCCAATTCGTGATACATTAAATTGCTGTGTGGATTTCTATGTC
TCTCTCTTGCTGCTATTTTCACTCAGTTTCCCAATACATTGATACCAGTAATTTAAAGAC
AGCCTTTCAGAAAGTGGTGCAATTTTGCCCTCGTCATTTGAACATTTTTTACATTGCTGT
CATATAGCCTGTCAAGAACATTTTGTCTGAGACGTTATATCTCAGTGAGACAGCAAATAT
AAAACATGTCAATTTTCACTAAGTTGTTT

InterProScan

TIGRFAM	tRNA_ribo_trans-like (IPR002616) - T[1-316] 4.4E-113
TIGRFAM	TGT (IPR004803) - T[1-317] 5.1E-115
SUPERFAMILY	TGT-like_sf (IPR036511) - T[1-315] 2.35E-121
Gene3D	TGT-like_sf (IPR036511) - T[1-323] 2.4E-137
Pfam	tRNA_ribo_trans-like (IPR002616) - T[82-314] 2.1E-88

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TGT_HUMAN	61.808 %	453	3.7E-160