Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L30.5.v1.C.SL16-1

Possible name(s)

QTRT1; QTRT2

Gene model

KH2012:KH.L30.5

Location

KhL30 [17,877 / 19,371]

Sequences

Amino acid sequence

Length: 352

>KH.L30.5.v1.C.SL16-1
GTLKGLIPEQLENIGIQIILGNTYHLGHQPGEEILKQAGGLHQFMGWRRALLTDSGGFQM
VSLIKLSELSEEGVKFVHPRDGAEMLLTPEKSMAIQNAIGADIMMQLDDVVTSTETNQER
FKEATARSVRWLDRCISAHKRTDQFLFPIIQGGLDEELRKQCLHEMTARPVPGFAVGGLS
GGECKDDFWKMVTVSTDGLPKDKPRYLMGVGYAADLIMCVALGCDMFDCVFPTRTARFGS
ALVPTGQLQLKNVSYATDMSPIQNDCTCTTCRTYTRAYLHLLFRTSHPSACHMVTVHNLM
YQFTLMRKIREAISEDKFPEFIKTSYLQLFGNPSKYPSWAVDAFASVGVNLK

Nucleotide sequence

Length: 1,494

>KH2012:KH.L30.5.v1.C.SL16-1
GGTACATTAAAGGGACTTATACCAGAACAACTAGAAAACATAGGGATACAAATAATCTTA
GGAAATACATACCACCTTGGGCATCAACCTGGGGAAGAAATATTGAAACAAGCTGGGGGG
TTGCATCAATTTATGGGCTGGAGGCGAGCCCTACTGACCGACAGTGGTGGGTTCCAAATG
GTGTCTTTAATTAAACTATCTGAACTATCAGAGGAAGGGGTAAAGTTTGTACATCCTCGC
GATGGTGCGGAAATGTTGTTAACGCCAGAGAAATCTATGGCGATACAAAACGCGATCGGT
GCCGATATAATGATGCAGCTTGATGATGTTGTGACAAGCACTGAGACAAACCAAGAGAGA
TTTAAAGAAGCAACAGCGCGATCTGTAAGGTGGCTAGATAGATGTATATCCGCGCATAAA
CGAACCGATCAATTCCTTTTCCCGATTATTCAAGGGGGTTTGGACGAAGAATTAAGAAAG
CAATGTCTGCATGAGATGACTGCGCGACCGGTGCCCGGATTCGCTGTTGGTGGGTTGAGT
GGGGGAGAATGTAAAGATGATTTTTGGAAGATGGTTACTGTCAGTACTGATGGATTACCT
AAAGATAAACCAAGATACTTAATGGGCGTTGGTTATGCTGCTGATCTTATAATGTGCGTC
GCACTTGGTTGTGACATGTTTGACTGTGTATTTCCAACTAGAACTGCTAGATTTGGGTCT
GCTTTGGTTCCTACTGGACAATTACAATTAAAAAACGTATCATACGCCACAGATATGTCA
CCAATTCAAAATGATTGTACATGTACAACATGTAGAACTTACACAAGGGCTTATCTTCAC
TTATTATTCCGGACGAGCCACCCTAGTGCTTGCCATATGGTCACAGTGCACAACTTAATG
TACCAATTTACACTGATGCGTAAAATAAGAGAAGCAATATCTGAGGACAAATTCCCTGAG
TTTATAAAAACATCGTACTTACAATTATTTGGTAACCCATCAAAATATCCGAGCTGGGCA
GTGGACGCGTTTGCCTCAGTTGGTGTCAATTTAAAATAAACTTCTATCTTTTCCAACTTC
ACATTTGGTTTGTTATGGGTGCCTTAGATTCTCTTTTATTTAAACTGCTGCATCAGAATT
CTATTCAACACGAGGGGATTGTTACATTGTAGTTCTGCAATATTGTATCTTCATTTATTT
CTTGCTAGTTAAAAGTATCCAAATTTTTCTTATATTTAAACTGCCAATTCGTGATACATT
AAATTGCTGTGTGGATTTCTATGTCTCTCTCTTGCTGCTATTTTCACTCAGTTTCCCAAT
ACATTGATACCAGTAATTTAAAGACAGCCTTTCAGAAAGTGGTGCAATTTTGCCCTCGTC
ATTTGAACATTTTTTACATTGCTGTCATATAGCCTGTCAAGAACATTTTGTCTGAGACGT
TATATCTCAGTGAGACAGCAAATATAAAACATGTCAATTTTCACTAAGTTGTTT

InterProScan

TIGRFAM	tRNA_ribo_trans-like (IPR002616) - T[1-325] 1.3E-115
TIGRFAM	TGT (IPR004803) - T[1-326] 4.6E-118
Gene3D	TGT-like_sf (IPR036511) - T[1-332] 1.7E-140
SUPERFAMILY	TGT-like_sf (IPR036511) - T[1-324] 1.57E-124
Pfam	tRNA_ribo_trans-like (IPR002616) - T[91-323] 2.3E-88

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TGT_HUMAN	61.364 %	461	3.27E-163