Aniseed - Transcript Card

Transcript 'KH2012:KH.L30.5.v1.C...'

Transcript Model

Transcript Id

KH2012:KH.L30.5.v1.C.SL6-1

Possible name(s)

QTRT1; QTRT2

Gene model

KH2012:KH.L30.5

Location

KhL30 [17,877 / 19,359]

Sequences

Amino acid sequence

Length: 348

>KH.L30.5.v1.C.SL6-1
GLIPEQLENIGIQIILGNTYHLGHQPGEEILKQAGGLHQFMGWRRALLTDSGGFQMVSLI
KLSELSEEGVKFVHPRDGAEMLLTPEKSMAIQNAIGADIMMQLDDVVTSTETNQERFKEA
TARSVRWLDRCISAHKRTDQFLFPIIQGGLDEELRKQCLHEMTARPVPGFAVGGLSGGEC
KDDFWKMVTVSTDGLPKDKPRYLMGVGYAADLIMCVALGCDMFDCVFPTRTARFGSALVP
TGQLQLKNVSYATDMSPIQNDCTCTTCRTYTRAYLHLLFRTSHPSACHMVTVHNLMYQFT
LMRKIREAISEDKFPEFIKTSYLQLFGNPSKYPSWAVDAFASVGVNLK

Nucleotide sequence

Length: 1,482

>KH2012:KH.L30.5.v1.C.SL6-1
GGACTTATACCAGAACAACTAGAAAACATAGGGATACAAATAATCTTAGGAAATACATAC
CACCTTGGGCATCAACCTGGGGAAGAAATATTGAAACAAGCTGGGGGGTTGCATCAATTT
ATGGGCTGGAGGCGAGCCCTACTGACCGACAGTGGTGGGTTCCAAATGGTGTCTTTAATT
AAACTATCTGAACTATCAGAGGAAGGGGTAAAGTTTGTACATCCTCGCGATGGTGCGGAA
ATGTTGTTAACGCCAGAGAAATCTATGGCGATACAAAACGCGATCGGTGCCGATATAATG
ATGCAGCTTGATGATGTTGTGACAAGCACTGAGACAAACCAAGAGAGATTTAAAGAAGCA
ACAGCGCGATCTGTAAGGTGGCTAGATAGATGTATATCCGCGCATAAACGAACCGATCAA
TTCCTTTTCCCGATTATTCAAGGGGGTTTGGACGAAGAATTAAGAAAGCAATGTCTGCAT
GAGATGACTGCGCGACCGGTGCCCGGATTCGCTGTTGGTGGGTTGAGTGGGGGAGAATGT
AAAGATGATTTTTGGAAGATGGTTACTGTCAGTACTGATGGATTACCTAAAGATAAACCA
AGATACTTAATGGGCGTTGGTTATGCTGCTGATCTTATAATGTGCGTCGCACTTGGTTGT
GACATGTTTGACTGTGTATTTCCAACTAGAACTGCTAGATTTGGGTCTGCTTTGGTTCCT
ACTGGACAATTACAATTAAAAAACGTATCATACGCCACAGATATGTCACCAATTCAAAAT
GATTGTACATGTACAACATGTAGAACTTACACAAGGGCTTATCTTCACTTATTATTCCGG
ACGAGCCACCCTAGTGCTTGCCATATGGTCACAGTGCACAACTTAATGTACCAATTTACA
CTGATGCGTAAAATAAGAGAAGCAATATCTGAGGACAAATTCCCTGAGTTTATAAAAACA
TCGTACTTACAATTATTTGGTAACCCATCAAAATATCCGAGCTGGGCAGTGGACGCGTTT
GCCTCAGTTGGTGTCAATTTAAAATAAACTTCTATCTTTTCCAACTTCACATTTGGTTTG
TTATGGGTGCCTTAGATTCTCTTTTATTTAAACTGCTGCATCAGAATTCTATTCAACACG
AGGGGATTGTTACATTGTAGTTCTGCAATATTGTATCTTCATTTATTTCTTGCTAGTTAA
AAGTATCCAAATTTTTCTTATATTTAAACTGCCAATTCGTGATACATTAAATTGCTGTGT
GGATTTCTATGTCTCTCTCTTGCTGCTATTTTCACTCAGTTTCCCAATACATTGATACCA
GTAATTTAAAGACAGCCTTTCAGAAAGTGGTGCAATTTTGCCCTCGTCATTTGAACATTT
TTTACATTGCTGTCATATAGCCTGTCAAGAACATTTTGTCTGAGACGTTATATCTCAGTG
AGACAGCAAATATAAAACATGTCAATTTTCACTAAGTTGTTT

InterProScan

TIGRFAM	tRNA_ribo_trans-like (IPR002616) - T[1-321] 3.3E-114
TIGRFAM	TGT (IPR004803) - T[1-322] 3.1E-116
Gene3D	TGT-like_sf (IPR036511) - T[1-328] 6.3E-139
SUPERFAMILY	TGT-like_sf (IPR036511) - T[2-320] 5.89E-123
Pfam	tRNA_ribo_trans-like (IPR002616) - T[87-319] 2.2E-88

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TGT_HUMAN	61.494 %	457	1.53E-161