Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L3.1.v1.A.SL5-1

Possible name(s)

AUH; ECHDC2; ECHS1

Gene model

KH2012:KH.L3.1

Location

KhL3 [84,512 / 88,298]

Sequences

Amino acid sequence

Length: 304

>KH.L3.1.v1.A.SL5-1
HMIMFCRNKLLRDVATLSFRNHKVFISKPFSTTLCLKTDEELVTTHLDGDLTGITILGIN
RPQSRNSIGKNLSRMLIKTVDELKYDPNIRVLIVRSMVPGIFCAGADLKERRTMKENEVG
PFVGRLRQLMSDLQQFPIPTIAAMDGTAVGGGLEMALGFDMRIAASDTKLGLVETKLAII
PGAGGTQNLARVVGPSIAKELIYTARVIDGNEAHRIGLVNHVVPQNENGDAAFSKSLELA
KEIVPQGPIALRMAKQAINRGSEVDLSSGLAFEQACYAQVIPTKDRLEGLTAFKEKRKPN
YKGH

Nucleotide sequence

Length: 1,169

>KH2012:KH.L3.1.v1.A.SL5-1
TTCATATGATCATGTTTTGCCGAAACAAACTTTTGCGTGACGTAGCTACACTTTCATTTC
GAAATCATAAAGTATTTATCTCAAAACCATTTTCCACAACATTATGCTTAAAGACTGATG
AAGAACTTGTTACGACACATCTAGATGGAGATCTTACAGGAATCACAATTCTGGGAATTA
ACAGACCACAGTCAAGAAATTCAATTGGTAAAAACTTATCACGAATGCTGATTAAAACCG
TAGACGAGTTGAAATATGACCCAAATATTCGCGTGTTAATAGTAAGAAGCATGGTGCCAG
GGATATTTTGTGCAGGTGCTGACTTAAAGGAAAGAAGAACGATGAAGGAGAATGAAGTTG
GACCGTTTGTAGGACGTCTAAGACAACTTATGTCTGACTTACAGCAATTTCCTATTCCCA
CTATAGCTGCTATGGATGGCACTGCAGTAGGGGGCGGTCTTGAAATGGCTTTAGGATTTG
ATATGCGCATTGCAGCTTCAGATACTAAACTTGGACTGGTTGAAACCAAGCTTGCCATCA
TTCCTGGTGCAGGTGGTACACAAAACTTAGCCAGGGTTGTTGGACCAAGTATTGCCAAAG
AACTGATCTACACTGCAAGAGTAATAGACGGCAACGAAGCGCACAGGATAGGTCTTGTAA
ATCATGTTGTACCGCAAAATGAAAACGGTGATGCTGCATTTTCTAAGTCACTTGAACTTG
CGAAAGAAATTGTTCCACAGGGGCCTATTGCTCTACGAATGGCTAAGCAAGCAATAAATC
GTGGGTCGGAAGTCGATTTATCTTCTGGGTTGGCGTTTGAACAAGCTTGTTATGCACAGG
TTATTCCAACTAAAGATAGACTTGAAGGGCTTACTGCTTTCAAGGAAAAGAGGAAACCAA
ATTATAAAGGACACTGATCATAATTATTTATATATGCAGAAAAATGACATAAATTTTAAA
TTACCGAAAGCAAGATTCTTTTATTTTAGGACCTTTTTAAACTTGAAATATTCAATCATA
AAATGACTGATTGTAATATTAAAATATGGACTCTTTTAGAAGAACATGAGTTGTTTATAA
GAATATTTATATTGCAGTAATTATAAAACATAGGTTAAAATTTTTAATCATTTTGAGAAT
GAAATAAAAATGGTGTTTACCTTTACCTA

InterProScan

SUPERFAMILY	ClpP/crotonase-like_dom_sf (IPR029045) - T[41-303] 3.43E-74
Pfam	Enoyl-CoA_hydra/iso (IPR001753) - T[53-303] 8.9E-57
Gene3D	enoyl-CoA_hydra_C (IPR014748) - T[245-304] 7.1E-30

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ECHM_HUMAN	30.545 %	135	9.32E-38
ECHD2_HUMAN	56.274 %	306	2.53E-104
AUHM_HUMAN	62.082 %	332	6.1E-114