Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L3.1.v1.A.SL8-1

Possible name(s)

AUH; ECHDC2; ECHS1

Gene model

KH2012:KH.L3.1

Location

KhL3 [84,512 / 88,333]

Sequences

Amino acid sequence

Length: 305

>KH.L3.1.v1.A.SL8-1
VHMIMFCRNKLLRDVATLSFRNHKVFISKPFSTTLCLKTDEELVTTHLDGDLTGITILGI
NRPQSRNSIGKNLSRMLIKTVDELKYDPNIRVLIVRSMVPGIFCAGADLKERRTMKENEV
GPFVGRLRQLMSDLQQFPIPTIAAMDGTAVGGGLEMALGFDMRIAASDTKLGLVETKLAI
IPGAGGTQNLARVVGPSIAKELIYTARVIDGNEAHRIGLVNHVVPQNENGDAAFSKSLEL
AKEIVPQGPIALRMAKQAINRGSEVDLSSGLAFEQACYAQVIPTKDRLEGLTAFKEKRKP
NYKGH

Nucleotide sequence

Length: 1,204

>KH2012:KH.L3.1.v1.A.SL8-1
GAAAAACCTTACTTATTTATTCAATCTTTAATAAGTTCATATGATCATGTTTTGCCGAAA
CAAACTTTTGCGTGACGTAGCTACACTTTCATTTCGAAATCATAAAGTATTTATCTCAAA
ACCATTTTCCACAACATTATGCTTAAAGACTGATGAAGAACTTGTTACGACACATCTAGA
TGGAGATCTTACAGGAATCACAATTCTGGGAATTAACAGACCACAGTCAAGAAATTCAAT
TGGTAAAAACTTATCACGAATGCTGATTAAAACCGTAGACGAGTTGAAATATGACCCAAA
TATTCGCGTGTTAATAGTAAGAAGCATGGTGCCAGGGATATTTTGTGCAGGTGCTGACTT
AAAGGAAAGAAGAACGATGAAGGAGAATGAAGTTGGACCGTTTGTAGGACGTCTAAGACA
ACTTATGTCTGACTTACAGCAATTTCCTATTCCCACTATAGCTGCTATGGATGGCACTGC
AGTAGGGGGCGGTCTTGAAATGGCTTTAGGATTTGATATGCGCATTGCAGCTTCAGATAC
TAAACTTGGACTGGTTGAAACCAAGCTTGCCATCATTCCTGGTGCAGGTGGTACACAAAA
CTTAGCCAGGGTTGTTGGACCAAGTATTGCCAAAGAACTGATCTACACTGCAAGAGTAAT
AGACGGCAACGAAGCGCACAGGATAGGTCTTGTAAATCATGTTGTACCGCAAAATGAAAA
CGGTGATGCTGCATTTTCTAAGTCACTTGAACTTGCGAAAGAAATTGTTCCACAGGGGCC
TATTGCTCTACGAATGGCTAAGCAAGCAATAAATCGTGGGTCGGAAGTCGATTTATCTTC
TGGGTTGGCGTTTGAACAAGCTTGTTATGCACAGGTTATTCCAACTAAAGATAGACTTGA
AGGGCTTACTGCTTTCAAGGAAAAGAGGAAACCAAATTATAAAGGACACTGATCATAATT
ATTTATATATGCAGAAAAATGACATAAATTTTAAATTACCGAAAGCAAGATTCTTTTATT
TTAGGACCTTTTTAAACTTGAAATATTCAATCATAAAATGACTGATTGTAATATTAAAAT
ATGGACTCTTTTAGAAGAACATGAGTTGTTTATAAGAATATTTATATTGCAGTAATTATA
AAACATAGGTTAAAATTTTTAATCATTTTGAGAATGAAATAAAAATGGTGTTTACCTTTA
CCTA

InterProScan

SUPERFAMILY	ClpP/crotonase-like_dom_sf (IPR029045) - T[42-304] 3.43E-74
Pfam	Enoyl-CoA_hydra/iso (IPR001753) - T[54-304] 9.0E-57
Gene3D	enoyl-CoA_hydra_C (IPR014748) - T[246-305] 7.1E-30

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ECHM_HUMAN	30.545 %	135	9.88E-38
ECHD2_HUMAN	56.274 %	306	2.44E-104
AUHM_HUMAN	62.082 %	332	6.13E-114