Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L3.1.v7.R.ND1-1

Possible name(s)

AUH; ECHDC2; ECHS1

Gene model

KH2012:KH.L3.1

Location

KhL3 [84,512 / 88,403]

Sequences

Amino acid sequence

Length: 198

>KH.L3.1.v7.R.ND1-1
VHMIMFCRNKLLRDVATLSFRNHKVFISKPFSTTLCLKTDEELVTTHLDGDLTGITILGI
NRPQSRNSIGKNLSRMLIKTVDELKYDPNIRVLIVRSMVPGIFCAGADLKERRTMKENEV
GPFVGRLRQLMSDLQQFPIPTIAAMDGTAVGGGLEMALGFDMRIAASDTKLGLVETKLAI
IPGAGAQDRSCKSCCTAK

Nucleotide sequence

Length: 1,188

>KH2012:KH.L3.1.v7.R.ND1-1
GATTGTAGATTGAGAAAATTCGTAAAATCACATAAACAATTGCCATACTTTCATGTTTAT
CCGTCAAAAGGAAAAACCTTACTTATTTATTCAATCTTTAATAAGTTCATATGATCATGT
TTTGCCGAAACAAACTTTTGCGTGACGTAGCTACACTTTCATTTCGAAATCATAAAGTAT
TTATCTCAAAACCATTTTCCACAACATTATGCTTAAAGACTGATGAAGAACTTGTTACGA
CACATCTAGATGGAGATCTTACAGGAATCACAATTCTGGGAATTAACAGACCACAGTCAA
GAAATTCAATTGGTAAAAACTTATCACGAATGCTGATTAAAACCGTAGACGAGTTGAAAT
ATGACCCAAATATTCGCGTGTTAATAGTAAGAAGCATGGTGCCAGGGATATTTTGTGCAG
GTGCTGACTTAAAGGAAAGAAGAACGATGAAGGAGAATGAAGTTGGACCGTTTGTAGGAC
GTCTAAGACAACTTATGTCTGACTTACAGCAATTTCCTATTCCCACTATAGCTGCTATGG
ATGGCACTGCAGTAGGGGGCGGTCTTGAAATGGCTTTAGGATTTGATATGCGCATTGCAG
CTTCAGATACTAAACTTGGACTGGTTGAAACCAAGCTTGCCATCATTCCTGGTGCAGGCG
CACAGGATAGGTCTTGTAAATCATGTTGTACCGCAAAATGAAAACGGTGATGCTGCATTT
TCTAAGTCACTTGAACTTGCGAAAGAAATTGTTCCACAGGGGCCTATTGCTCTACGAATG
GCTAAGCAAGCAATAAATCGTGGGTCGGAAGTCGATTTATCTTCTGGGTTGGCGTTTGAA
CAAGCTTGTTATGCACAGGTTATTCCAACTAAAGATAGACTTGAAGGGCTTACTGCTTTC
AAGGAAAAGAGGAAACCAAATTATAAAGGACACTGATCATAATTATTTATATATGCAGAA
AAATGACATAAATTTTAAATTACCGAAAGCAAGATTCTTTTATTTTAGGACCTTTTTAAA
CTTGAAATATTCAATCATAAAATGACTGATTGTAATATTAAAATATGGACTCTTTTAGAA
GAACATGAGTTGTTTATAAGAATATTTATATTGCAGTAATTATAAAACATAGGTTAAAAT
TTTTAATCATTTTGAGAATGAAATAAAAATGGTGTTTACCTTTACCTA

InterProScan

SUPERFAMILY	ClpP/crotonase-like_dom_sf (IPR029045) - T[42-187] 3.73E-38
Pfam	Enoyl-CoA_hydra/iso (IPR001753) - T[54-192] 1.3E-28

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ECHA_HUMAN	31.361 %	75.1	5.27E-16
ECHD2_HUMAN	52.703 %	154	1.2E-46
AUHM_HUMAN	58.17 %	164	8.01E-50