- Transcript 'KH2012:KH.C8.248.v6....' >
- Transcript 'KH2012:KH.S770.1.v4....' >
- Transcript 'KH2012:KH.L31.3.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L31.3.v1.A.ND3-1
Possible name(s)
TRIM54; TRIM55; TRIM63
Gene model
Location
KhL31 [469 / 9,732]
Amino acid sequence
Length: 576
>KH.L31.3.v1.A.ND3-1
RCPTCRYEVVLDRHGVYGLQRNLLVENIIDMYQTEGRKPTFKTSEVVMCDQHEEEKVNIY
CVTCQKPTCSLCKVFGDHQTCNVSPMEKIYKEQKSEISDSIALLVAGNDRLQAIISQTEE
LGKMAECNGRKVKSDLCAAFDKLYAVLEQRKTDMMNRITSDVQERSQVIKEMLKSYGLQL
ESASKLMEASLALVEERSVPVFLTQARETINKCPTCRYEVVLDRHGVYGLQRNLLVENII
DMYQTEGRKPTFKTSEVVMCDQHEEEKVNIYCVTCQKPTCSLCKVFGDHQTCNVSPMEKI
YKEQKSEISDSIALLVAGNDRLQAIISQTEELGKMAECNGRKVKSDLCAAFDKLYAVLEQ
RKTDMMNRITSDVQERSQVIKEMLKSYGLQLESASKLMEASLALVEERSVPVFLTQARET
INKIKATSRDSEVRKPPFKIQDMDEFTVDFNNHETALYKLDFSALQVCDATTNDNNETND
DETANQSEGATSNTADNDDDSEEEYDVTVEDDVGDSDATSVTSRSDVGSSYSGARSNNEA
TGRSQSPSSSRNNGSSSGATESSEARRPLEERSSWW
Nucleotide sequence
Length: 2,347
>KH2012:KH.L31.3.v1.A.ND3-1
TCAGGTGTCCTACGTGTCGTTACGAAGTTGTATTGGACCGACATGGAGTCTACGGCTTGC
AGAGAAACCTACTTGTTGAGAATATTATTGACATGTATCAAACAGAAGGGAGAAAACCAA
CTTTCAAAACTTCAGAGGTTGTAATGTGCGACCAACATGAAGAAGAGAAAGTGAATATTT
ACTGCGTGACTTGTCAGAAACCAACGTGTTCTCTGTGCAAAGTATTTGGGGACCATCAGA
CGTGTAATGTCTCGCCTATGGAGAAAATATACAAGGAACAAAAGAGTGAAATATCTGACT
CTATAGCACTCCTAGTGGCAGGAAATGATCGTCTTCAAGCAATTATTTCACAAACAGAAG
AGCTTGGAAAAATGGCCGAATGTAACGGTCGTAAAGTGAAAAGTGATTTATGCGCTGCGT
TTGACAAACTTTACGCCGTGTTGGAGCAACGTAAGACTGATATGATGAATCGAATAACTT
CTGATGTTCAAGAAAGAAGTCAGGTTATAAAAGAAATGTTAAAATCTTACGGTCTTCAAC
TTGAGTCAGCAAGCAAGTTAATGGAAGCTTCACTTGCGTTGGTTGAGGAACGAAGCGTTC
CTGTGTTTCTTACACAAGCGAGGGAGACAATTAATAAGTGTCCTACGTGTCGTTACGAAG
TTGTATTGGACCGACATGGAGTCTACGGCTTGCAGAGAAACCTACTTGTTGAGAATATTA
TTGACATGTATCAAACAGAAGGGAGAAAACCAACTTTCAAAACTTCAGAGGTTGTAATGT
GCGACCAACATGAAGAAGAGAAAGTGAATATTTACTGCGTGACTTGTCAGAAACCAACGT
GTTCTCTGTGCAAAGTATTTGGGGACCATCAGACGTGTAATGTCTCGCCTATGGAGAAAA
TATACAAGGAACAAAAGAGTGAAATATCTGACTCTATAGCACTCCTAGTGGCAGGAAATG
ATCGTCTTCAAGCAATTATTTCACAAACAGAAGAGCTTGGAAAAATGGCCGAATGTAACG
GTCGTAAAGTGAAAAGTGATTTATGCGCTGCGTTTGACAAACTTTACGCCGTGTTGGAGC
AACGTAAGACTGATATGATGAATCGAATAACTTCTGATGTTCAAGAAAGAAGTCAGGTTA
TAAAAGAAATGTTAAAATCTTACGGTCTTCAACTTGAGTCAGCAAGCAAGTTAATGGAAG
CTTCACTTGCGTTGGTTGAGGAACGAAGCGTTCCTGTGTTTCTTACACAAGCGAGGGAGA
CAATTAATAAAATCAAAGCCACAAGTCGAGACTCCGAGGTCAGGAAGCCTCCGTTTAAAA
TACAAGACATGGACGAGTTCACCGTTGATTTCAACAATCACGAAACTGCGCTTTATAAAC
TTGACTTCTCAGCTTTGCAGGTTTGTGACGCAACAACGAACGATAATAACGAAACAAACG
ATGATGAAACCGCCAACCAATCAGAAGGCGCCACATCAAACACAGCTGACAACGATGACG
ATTCAGAAGAGGAGTATGACGTCACAGTGGAAGATGACGTGGGCGATTCTGACGCAACAT
CTGTGACGTCACGAAGTGACGTAGGCAGCAGCTACAGCGGAGCAAGATCTAACAATGAAG
CAACCGGTCGCAGCCAATCACCTTCAAGCTCACGTAACAACGGTTCGTCAAGTGGCGCCA
CAGAGTCGAGTGAAGCAAGACGGCCACTAGAGGAGAGAAGCAGTTGGTGGTAACCATGGT
TACATTACGTCACTTCCTCTCTGCATGCTGCTCATACGTCATCAACATCAGCTACGTCAT
CATACAATATCTCATTTCATGACGCCATAATCATTGCTCTTCAATCGCTCGCTTCCGTCA
CTGTTTATTACGTCATATTATTACTTACGCAATATTGCACCCGGGACCTTCTGGTACGCA
GCCCCCCCTTTATTAATTAATCAAATCGTTCTGTTACGCTTTGGTGACAACGTACTATAA
AACGTACACCCAAGCATTACACTAATCAAGTCGCATTAACTCCTAACCAAAGCGTAACCG
AGCGGTTTGATTGGTTATAAACGAGCTGGCTGCGTAGGAGGCTGTGTTTTGGATATTTAG
ATCATTCTGTCTTATGTGAAAGCGTTAGATTCGCACAATAAGGTTGCCAGGTATCGCCAA
GTATCTTAATGGCCAACGAGTAAAGATTAAAAAGGCTTTGCCGTGCATTGGTTTTCAAAG
TGATTATATAACTAGTTGCTTACCGAGTGTGTGTTTAATTGCAGTTACCGCTTTTTGTTA
ATTGCTTGAACATTATTTGATTGCTCATCGCTTCATACGTTTGCATTACACATATGCTTG
TTAGTGA
| SMART |
Znf_B-box (IPR000315) - T[44-86] 6.0E-7 - T[255-297] 6.0E-7 |
| ProSiteProfiles |
Znf_B-box (IPR000315) - T[44-86] 11.832 - T[255-297] 11.832 |
| Pfam |
Znf_B-box (IPR000315) - T[45-80] 1.7E-6 - T[256-291] 1.7E-6 |
| CDD |
Znf_B-box (IPR000315) - T[47-86] 7.55929E-7 - T[258-297] 7.55929E-7 |
| ProSiteProfiles |
COS_domain (IPR017903) - T[405-463] 14.399 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRI54_HUMAN | 46.182 % | 261 | 2.91E-82 |
| TRI63_HUMAN | 42.46 % | 238 | 1.54E-73 |
| TRI55_HUMAN | 44.643 % | 255 | 9.69E-78 |