- Clone 'ma130c09' >
- Transcript 'KH2012:KH.L35.11.v1....'
Transcript Model
Transcript Id
KH2012:KH.L35.11.v1.B.SL2-1
Possible name(s)
PTPRA; PTPRC; PTPRE
Gene model
Location
KhL35 [48,978 / 60,487]
Amino acid sequence
Length: 1,048
>KH.L35.11.v1.B.SL2-1
ESTKHNGAYTQRRMFNKLFIVSVWMLITQCYGQGPVTIVPYNGIELKFYAIRKTYEQAKT
ACESDNAQLVVVKSQAMQDIITPHLDSTISYIAWGQYDYGVGYWMGLRKLAGANIHDYKA
LDGTNYVNKPAYTNWNNVEPNALKSQLACAYMCPYNNVYGINGAYNWFTDSAFPNVSKGG
WWTFHCTQKNYYICQRAFCATNPCRYGSCVALATSYKCNCDPGYSGSLCGDDLCSPQPCQ
NGGSCNRVPGNYTCSCLNGFVGRNCETEYFFNVGDLCLIHVNSRGRKTFRESLSQCQSLN
ASLAIIKSSQVQTAILNHHNFGVGQTWLGGFSNHSKWLWLDSSDMVYNNWLNGAPVVNDT
NCVSLAPNGTWVHSYCEDKHGYACEKSVDGRDLCSSSPCQNNATCISSGCNVHCVCTSGY
MGSNCAMIVPRTGGAGTSSSTVYIAIAVTCGLLLIVIVVLILYKRRTRPKSPKPIMMNAN
PPVEAVAYVNVIAPSENAYSSIDIHQGDVLYDDIATTSSPYLIRKDKFLQHFQTLAANEG
KLCIEEFKLLAAASAKIEMQTIHGENNKGKNRFKNILPYDSTRVVLSTANGQSDYINGNY
VDCYNQPHKYIATQGPLPKTETDFWRMVWESKCRVIVMLTNLLEGNKRKCHKYWPEIGAL
GKHGDLIIECVNETSYGGYVIREMKVTNNKTTRKLKQFHFTSWPDHNVPITTTSLHRFKC
AVLDYHKSNQVDNSPIVVHCSAGAGRTGTFIGFDSLMAEMDHRSCVNVFETVLAMRKQRV
DMVQNSKQYLLLHKLVAEDCKIGNTDFSVEELEERIQRLENWTIRENQVKHSNIKGAAYD
ASFVESYSESLEIIVAAGPTHESLENFWHAVTSNNVGTIVSLRSSQEERKLGFQFLPSQQ
PLMINDITIEEQTKSTSGCITDKSLMITTPRGKNMVRYFHFQTWDPDTVPNTTAELIDLV
KRLQAQTGKGKLMIFCSDGINRSGAFVALINLMERVNIEGSIDIFRTVKDLRDMRIGMVS
TELLYKFLHNTMVDYVSTFQVYSNFGCK
Nucleotide sequence
Length: 3,611
>KH2012:KH.L35.11.v1.B.SL2-1
GAATCTACAAAACATAACGGAGCTTATACACAAAGAAGAATGTTTAATAAACTGTTTATT
GTTTCTGTTTGGATGCTCATTACTCAGTGCTATGGCCAAGGACCTGTCACAATTGTACCA
TACAACGGGATTGAGCTGAAATTTTACGCTATTCGTAAAACATACGAGCAAGCCAAAACT
GCTTGTGAGTCCGACAACGCCCAGCTAGTAGTGGTGAAGAGTCAAGCAATGCAAGATATC
ATCACTCCACACCTCGATTCCACCATTAGTTACATTGCATGGGGACAATATGATTACGGT
GTTGGTTATTGGATGGGGCTCAGGAAATTAGCAGGTGCAAATATACACGACTACAAAGCT
CTTGATGGTACCAACTACGTCAACAAGCCCGCATATACAAACTGGAACAATGTGGAACCG
AACGCTCTGAAGTCTCAATTAGCTTGTGCGTATATGTGTCCCTACAATAATGTGTATGGG
ATAAATGGAGCGTATAATTGGTTCACGGACAGCGCATTTCCCAACGTAAGTAAGGGTGGC
TGGTGGACCTTTCACTGCACACAGAAGAATTACTACATTTGTCAAAGAGCCTTTTGCGCA
ACGAACCCTTGTAGATACGGATCGTGCGTTGCTTTAGCGACGAGCTACAAATGTAATTGC
GATCCTGGTTACTCTGGATCTCTGTGTGGCGACGATCTATGCTCCCCCCAGCCTTGTCAG
AATGGTGGGAGTTGTAACAGAGTTCCCGGCAACTACACTTGTTCATGCTTAAATGGCTTT
GTGGGAAGGAATTGTGAAACAGAATACTTCTTCAATGTTGGTGACCTTTGTCTCATCCAT
GTTAACAGCAGAGGAAGAAAAACCTTCAGAGAATCTTTATCTCAATGCCAGTCGCTCAAT
GCTAGCCTTGCGATCATAAAAAGCAGTCAAGTCCAAACAGCCATACTTAACCACCACAAC
TTTGGTGTTGGTCAAACTTGGCTAGGTGGTTTTTCAAACCACTCAAAATGGCTCTGGCTT
GATTCAAGTGATATGGTGTACAACAACTGGTTAAATGGTGCACCAGTGGTTAATGATACA
AACTGTGTTAGTTTAGCTCCAAATGGAACATGGGTGCATTCTTATTGTGAAGATAAACAC
GGATATGCTTGTGAAAAATCAGTTGACGGAAGAGATCTTTGTTCCTCTTCTCCTTGTCAA
AACAATGCAACATGTATCAGCAGTGGTTGTAATGTTCACTGTGTGTGTACATCTGGTTAC
ATGGGATCTAACTGTGCTATGATTGTACCACGAACTGGTGGTGCTGGAACTTCTAGTTCA
ACTGTGTACATTGCCATTGCAGTGACTTGTGGGTTGCTACTGATTGTCATAGTTGTCCTT
ATACTCTACAAACGAAGGACTCGACCTAAATCACCTAAACCAATAATGATGAATGCTAAT
CCACCAGTTGAAGCGGTTGCATATGTAAATGTAATTGCACCAAGCGAAAATGCTTATTCT
AGCATTGATATCCACCAAGGTGATGTTTTATACGATGACATTGCCACCACTTCAAGCCCG
TACTTGATTAGGAAAGATAAATTTCTTCAGCACTTTCAAACCCTTGCTGCTAATGAAGGA
AAACTGTGCATAGAAGAGTTTAAATTACTTGCTGCTGCTTCAGCCAAGATAGAAATGCAA
ACAATTCATGGTGAAAACAACAAGGGAAAGAACAGATTCAAGAATATATTGCCATATGAC
AGCACACGAGTTGTATTATCCACTGCAAATGGGCAAAGTGATTATATTAATGGAAACTAT
GTGGATTGTTACAACCAACCCCATAAATACATTGCCACACAAGGCCCTCTTCCTAAAACT
GAGACCGATTTTTGGAGGATGGTTTGGGAGAGTAAGTGTCGCGTTATTGTGATGTTGACA
AACTTATTGGAAGGAAATAAAAGGAAGTGTCACAAGTACTGGCCAGAGATTGGAGCATTG
GGTAAACATGGAGATCTTATAATAGAGTGCGTAAACGAAACTTCATATGGTGGATATGTG
ATTCGAGAGATGAAAGTTACAAACAACAAGACCACACGAAAGTTAAAGCAGTTCCACTTC
ACATCATGGCCCGACCATAATGTGCCCATCACCACGACTTCACTTCACAGATTCAAATGT
GCTGTGCTAGATTATCATAAATCAAACCAAGTAGACAACTCTCCTATTGTTGTTCATTGC
AGTGCAGGAGCTGGTAGAACTGGAACCTTCATTGGATTTGACAGTTTGATGGCTGAAATG
GACCACAGATCATGTGTTAACGTGTTTGAAACAGTGCTGGCTATGAGAAAGCAAAGAGTG
GATATGGTTCAAAACTCAAAACAATATTTACTTCTTCACAAATTGGTGGCGGAAGATTGT
AAGATTGGAAACACTGATTTCTCTGTGGAAGAATTAGAAGAAAGAATTCAGCGACTTGAA
AATTGGACAATTCGGGAAAATCAGGTTAAACATTCCAACATCAAAGGAGCTGCATACGAC
GCTTCTTTCGTCGAGAGTTACAGCGAAAGCCTGGAGATAATTGTAGCGGCTGGTCCCACT
CATGAATCGCTTGAAAACTTCTGGCACGCTGTGACTTCCAACAACGTTGGAACAATTGTT
TCGCTGCGAAGCTCGCAGGAAGAAAGAAAACTTGGATTCCAATTCTTACCCTCACAACAA
CCATTGATGATTAATGACATCACAATTGAAGAACAAACTAAATCGACAAGTGGTTGCATC
ACAGACAAATCTTTGATGATTACAACACCAAGGGGGAAGAATATGGTGAGATACTTTCAT
TTCCAAACCTGGGATCCAGACACTGTACCCAACACAACAGCAGAGTTGATTGATCTTGTT
AAACGACTTCAAGCACAGACTGGGAAAGGAAAACTTATGATATTTTGCAGTGATGGAATA
AACCGCAGTGGTGCGTTTGTTGCTCTTATTAACTTGATGGAGAGAGTTAACATTGAAGGA
AGTATTGACATCTTTAGAACTGTGAAGGATTTGAGAGATATGAGGATTGGGATGGTTTCT
ACAGAGCTACTTTACAAATTCCTTCACAACACCATGGTGGATTATGTTTCAACTTTTCAA
GTTTACTCAAACTTCGGATGCAAATAGTTTAAGGAACAAGCAAATGAGCTTAACTTTTGT
TGTGCTAGCTTGGTGAGGGAGTTGGAAGTCGTTAGAACACACTTTTTTCCCTTTCACACA
ACTCGTACCCGCTTATGAGTTACAATAAACGTTTGTTAATGATGATTTTCTAACAATTTA
CACAGCCCATTAGTGACCACTGGGGTTGGAAAAAATTTTCATTAAATGTGTGTGATGGAA
CATAAACAGTAACCACCAGTGCCAAACTTTCTTATGATTTGTACTGATATATAAATTGAC
TGCTTTTGTATAAAATAACGAACTTTTTGATGGCAATGTTTCATCTGATATTCTCCCCCA
CATCCCACTGCTATTATTTTAATAATGTTAATTCAATCAGTGCTTTTTATTAAAAGGATG
ATTCTTATTAAACCGTTTCATATTGGCCTGCATGTTTGTGAATAAACTCATTAGAAAATT
CATGTTTAATC
| SUPERFAMILY |
CTDL_fold (IPR016187) - T[25-199] 5.42E-18 - T[259-388] 8.4E-23 |
| SMART |
C-type_lectin-like (IPR001304) - T[34-195] 8.1E-15 - T[265-385] 6.2E-20 |
| Gene3D |
C-type_lectin-like/link_sf (IPR016186) - T[39-196] 2.5E-19 - T[263-388] 9.1E-21 |
| ProSiteProfiles |
C-type_lectin-like (IPR001304) - T[41-195] 12.864 - T[273-385] 15.885 |
| Pfam |
C-type_lectin-like (IPR001304) - T[52-196] 7.1E-12 - T[286-386] 1.4E-11 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[195-227] 8.639 - T[230-266] 19.821 - T[390-426] 14.354 |
| SMART |
EGF-like_dom (IPR000742) - T[198-230] 2.0E-4 - T[233-266] 1.0E-5 - T[393-426] 0.0021 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[199-230] 0.15 - T[232-266] 9.8E-4 |
| Pfam |
EGF-like_dom (IPR000742) - T[199-227] 1.6E-4 - T[234-264] 1.3E-6 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[254-265] . - T[254-265] . - T[414-425] . - T[414-425] . |
| Gene3D |
Prot-tyrosine_phosphatase-like (IPR029021) - T[513-801] 9.6E-100 - T[809-1046] 1.7E-43 |
| SUPERFAMILY |
Prot-tyrosine_phosphatase-like (IPR029021) - T[523-798] 1.15E-95 - T[839-1043] 3.96E-41 |
| SMART |
PTPase_domain (IPR000242) - T[542-801] 5.8E-107 - T[808-1037] 3.2E-21 |
| ProSiteProfiles |
PTPase_domain (IPR000242) - T[543-799] 51.664 - T[813-1035] 24.48 |
| Pfam |
PTPase_domain (IPR000242) - T[567-797] 5.5E-79 - T[828-1033] 1.1E-38 |
| PRINTS |
PTPase_domain (IPR000242) - T[594-601] 2.3E-34 - T[610-630] 2.3E-34 - T[693-710] 2.3E-34 - T[735-753] 2.3E-34 - T[766-781] 2.3E-34 - T[782-792] 2.3E-34 |
| SMART |
Tyr_Pase_cat (IPR003595) - T[694-798] 1.2E-32 - T[935-1034] 7.1E-21 |
| ProSiteProfiles |
TYR_PHOSPHATASE_dom (IPR000387) - T[716-790] 18.328 - T[954-1026] 15.561 |
| ProSitePatterns |
Tyr_Pase_AS (IPR016130) - T[738-748] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PTPRA_HUMAN | 28.478 % | 305 | 1.43E-89 |
| PTPRE_HUMAN | 35.009 % | 321 | 1.41E-96 |
| PTPRC_HUMAN | 31.14 % | 290 | 8.14E-82 |