- EST 'AV873550' >
- Clone 'ma337k04' >
- Clone 'AHC0AAA139YF05' >
- Transcript 'KH2012:KH.L35.11.v1....'
Transcript Model
Transcript Id
KH2012:KH.L35.11.v1.R.ND1-1
Possible name(s)
PTPRA; PTPRC; PTPRE
Gene model
Location
KhL35 [48,978 / 60,482]
Amino acid sequence
Length: 1,046
>KH.L35.11.v1.R.ND1-1
TKHNGAYTQRRMFNKLFIVSVWMLITQCYGQGPVTIVPYNGIELKFYAIRKTYEQAKTAC
ESDNAQLVVVKSQAMQDIITPHLDSTISYIAWGQYDYGVGYWMGLRKLAGANIHDYKALD
GTNYVNKPAYTNWNNVEPNALKSQLACAYMCPYNNVYGINGAYNWFTDSAFPNVSKGGWW
TFHCTQKNYYICQRAFCATNPCRYGSCVALATSYKCNCDPGYSGSLCGDDLCSPQPCQNG
GSCNRVPGNYTCSCLNGFVGRNCETEYFFNVGDLCLIHVNSRGRKTFRESLSQCQSLNAS
LAIIKSSQVQTAILNHHNFGVGQTWLGGFSNHSKWLWLDSSDMVYNNWLNGAPVVNDTNC
VSLAPNGTWVHSYCEDKHGYACEKSVDGRDLCSSSPCQNNATCISSGCNVHCVCTSGYMG
SNCAMIVPRTGGAGTSSSTVYIAIAVTCGLLLIVIVVLILYKRRTRPKSPKPIMMNANPP
VEAVAYVNVIAPSENAYSSIDIHQGDVLYDDIATTSSPYLIRKDKFLQHFQTLAANEGKL
CIEEFKLLAAASAKIEMQTIHGENNKGKNRFKNILPYDSTRVVLSTANGQSDYINGNYVD
CYNQPHKYIATQGPLPKTETDFWRMVWESKCRVIVMLTNLLEGNKRKCHKYWPEIGALGK
HGDLIIECVNETSYGGYVIREMKVTNNKTTRKLKQFHFTSWPDHNVPITTTSLHRFKCAV
LDYHKSNQVDNSPIVVHCSAGAGRTGTFIGFDSLMAEMDHRSCVNVFETVLAMRKQRVDM
VQNSKQYLLLHKLVAEDCKIGNTDFSVEELEERIQRLENWTIRENQVKHSNIKGAAYDAS
FVESYSESLEIIVAAGPTHESLENFWHAVTSNNVGTIVSLRSSQEERKLGFQFLPSQQPL
MINDITIEEQTKSTSGCITDKSLMITTPRGKNMVRYFHFQTWDPDTVPNTTAELIDLVKR
LQAQTGKGKLMIFCSDGINRSGAFVALINLMERVNIEGSIDIFRTVKDLRDMRIGMVSTE
LLYKFLHNTMVDYVSTFQVYSNFGCK
Nucleotide sequence
Length: 3,606
>KH2012:KH.L35.11.v1.R.ND1-1
TACAAAACATAACGGAGCTTATACACAAAGAAGAATGTTTAATAAACTGTTTATTGTTTC
TGTTTGGATGCTCATTACTCAGTGCTATGGCCAAGGACCTGTCACAATTGTACCATACAA
CGGGATTGAGCTGAAATTTTACGCTATTCGTAAAACATACGAGCAAGCCAAAACTGCTTG
TGAGTCCGACAACGCCCAGCTAGTAGTGGTGAAGAGTCAAGCAATGCAAGATATCATCAC
TCCACACCTCGATTCCACCATTAGTTACATTGCATGGGGACAATATGATTACGGTGTTGG
TTATTGGATGGGGCTCAGGAAATTAGCAGGTGCAAATATACACGACTACAAAGCTCTTGA
TGGTACCAACTACGTCAACAAGCCCGCATATACAAACTGGAACAATGTGGAACCGAACGC
TCTGAAGTCTCAATTAGCTTGTGCGTATATGTGTCCCTACAATAATGTGTATGGGATAAA
TGGAGCGTATAATTGGTTCACGGACAGCGCATTTCCCAACGTAAGTAAGGGTGGCTGGTG
GACCTTTCACTGCACACAGAAGAATTACTACATTTGTCAAAGAGCCTTTTGCGCAACGAA
CCCTTGTAGATACGGATCGTGCGTTGCTTTAGCGACGAGCTACAAATGTAATTGCGATCC
TGGTTACTCTGGATCTCTGTGTGGCGACGATCTATGCTCCCCCCAGCCTTGTCAGAATGG
TGGGAGTTGTAACAGAGTTCCCGGCAACTACACTTGTTCATGCTTAAATGGCTTTGTGGG
AAGGAATTGTGAAACAGAATACTTCTTCAATGTTGGTGACCTTTGTCTCATCCATGTTAA
CAGCAGAGGAAGAAAAACCTTCAGAGAATCTTTATCTCAATGCCAGTCGCTCAATGCTAG
CCTTGCGATCATAAAAAGCAGTCAAGTCCAAACAGCCATACTTAACCACCACAACTTTGG
TGTTGGTCAAACTTGGCTAGGTGGTTTTTCAAACCACTCAAAATGGCTCTGGCTTGATTC
AAGTGATATGGTGTACAACAACTGGTTAAATGGTGCACCAGTGGTTAATGATACAAACTG
TGTTAGTTTAGCTCCAAATGGAACATGGGTGCATTCTTATTGTGAAGATAAACACGGATA
TGCTTGTGAAAAATCAGTTGACGGAAGAGATCTTTGTTCCTCTTCTCCTTGTCAAAACAA
TGCAACATGTATCAGCAGTGGTTGTAATGTTCACTGTGTGTGTACATCTGGTTACATGGG
ATCTAACTGTGCTATGATTGTACCACGAACTGGTGGTGCTGGAACTTCTAGTTCAACTGT
GTACATTGCCATTGCAGTGACTTGTGGGTTGCTACTGATTGTCATAGTTGTCCTTATACT
CTACAAACGAAGGACTCGACCTAAATCACCTAAACCAATAATGATGAATGCTAATCCACC
AGTTGAAGCGGTTGCATATGTAAATGTAATTGCACCAAGCGAAAATGCTTATTCTAGCAT
TGATATCCACCAAGGTGATGTTTTATACGATGACATTGCCACCACTTCAAGCCCGTACTT
GATTAGGAAAGATAAATTTCTTCAGCACTTTCAAACCCTTGCTGCTAATGAAGGAAAACT
GTGCATAGAAGAGTTTAAATTACTTGCTGCTGCTTCAGCCAAGATAGAAATGCAAACAAT
TCATGGTGAAAACAACAAGGGAAAGAACAGATTCAAGAATATATTGCCATATGACAGCAC
ACGAGTTGTATTATCCACTGCAAATGGGCAAAGTGATTATATTAATGGAAACTATGTGGA
TTGTTACAACCAACCCCATAAATACATTGCCACACAAGGCCCTCTTCCTAAAACTGAGAC
CGATTTTTGGAGGATGGTTTGGGAGAGTAAGTGTCGCGTTATTGTGATGTTGACAAACTT
ATTGGAAGGAAATAAAAGGAAGTGTCACAAGTACTGGCCAGAGATTGGAGCATTGGGTAA
ACATGGAGATCTTATAATAGAGTGCGTAAACGAAACTTCATATGGTGGATATGTGATTCG
AGAGATGAAAGTTACAAACAACAAGACCACACGAAAGTTAAAGCAGTTCCACTTCACATC
ATGGCCCGACCATAATGTGCCCATCACCACGACTTCACTTCACAGATTCAAATGTGCTGT
GCTAGATTATCATAAATCAAACCAAGTAGACAACTCTCCTATTGTTGTTCATTGCAGTGC
AGGAGCTGGTAGAACTGGAACCTTCATTGGATTTGACAGTTTGATGGCTGAAATGGACCA
CAGATCATGTGTTAACGTGTTTGAAACAGTGCTGGCTATGAGAAAGCAAAGAGTGGATAT
GGTTCAAAACTCAAAACAATATTTACTTCTTCACAAATTGGTGGCGGAAGATTGTAAGAT
TGGAAACACTGATTTCTCTGTGGAAGAATTAGAAGAAAGAATTCAGCGACTTGAAAATTG
GACAATTCGGGAAAATCAGGTTAAACATTCCAACATCAAAGGAGCTGCATACGACGCTTC
TTTCGTCGAGAGTTACAGCGAAAGCCTGGAGATAATTGTAGCGGCTGGTCCCACTCATGA
ATCGCTTGAAAACTTCTGGCACGCTGTGACTTCCAACAACGTTGGAACAATTGTTTCGCT
GCGAAGCTCGCAGGAAGAAAGAAAACTTGGATTCCAATTCTTACCCTCACAACAACCATT
GATGATTAATGACATCACAATTGAAGAACAAACTAAATCGACAAGTGGTTGCATCACAGA
CAAATCTTTGATGATTACAACACCAAGGGGGAAGAATATGGTGAGATACTTTCATTTCCA
AACCTGGGATCCAGACACTGTACCCAACACAACAGCAGAGTTGATTGATCTTGTTAAACG
ACTTCAAGCACAGACTGGGAAAGGAAAACTTATGATATTTTGCAGTGATGGAATAAACCG
CAGTGGTGCGTTTGTTGCTCTTATTAACTTGATGGAGAGAGTTAACATTGAAGGAAGTAT
TGACATCTTTAGAACTGTGAAGGATTTGAGAGATATGAGGATTGGGATGGTTTCTACAGA
GCTACTTTACAAATTCCTTCACAACACCATGGTGGATTATGTTTCAACTTTTCAAGTTTA
CTCAAACTTCGGATGCAAATAGTTTAAGGAACAAGCAAATGAGCTTAACTTTTGTTGTGC
TAGCTTGGTGAGGGAGTTGGAAGTCGTTAGAACACACTTTTTTCCCTTTCACACAACTCG
TACCCGCTTATGAGTTACAATAAACGTTTGTTAATGATGATTTTCTAACAATTTACACAG
CCCATTAGTGACCACTGGGGTTGGAAAAAATTTTCATTAAATGTGTGTGATGGAACATAA
ACAGTAACCACCAGTGCCAAACTTTCTTATGATTTGTACTGATATATAAATTGACTGCTT
TTGTATAAAATAACGAACTTTTTGATGGCAATGTTTCATCTGATATTCTCCCCCACATCC
CACTGCTATTATTTTAATAATGTTAATTCAATCAGTGCTTTTTATTAAAAGGATGATTCT
TATTAAACCGTTTCATATTGGCCTGCATGTTTGTGAATAAACTCATTAGAAAATTCATGT
TTAATC
| SUPERFAMILY |
CTDL_fold (IPR016187) - T[24-197] 5.42E-18 - T[257-386] 8.4E-23 |
| SMART |
C-type_lectin-like (IPR001304) - T[32-193] 8.1E-15 - T[263-383] 6.2E-20 |
| Gene3D |
C-type_lectin-like/link_sf (IPR016186) - T[37-194] 2.5E-19 - T[261-386] 9.1E-21 |
| ProSiteProfiles |
C-type_lectin-like (IPR001304) - T[39-193] 12.864 - T[271-383] 15.885 |
| Pfam |
C-type_lectin-like (IPR001304) - T[50-194] 7.1E-12 - T[284-384] 1.4E-11 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[193-225] 8.639 - T[228-264] 19.821 - T[388-424] 14.354 |
| SMART |
EGF-like_dom (IPR000742) - T[196-228] 2.0E-4 - T[231-264] 1.0E-5 - T[391-424] 0.0021 |
| Pfam |
EGF-like_dom (IPR000742) - T[197-225] 1.6E-4 - T[232-262] 1.3E-6 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[197-228] 0.15 - T[230-264] 9.8E-4 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[252-263] . - T[252-263] . - T[412-423] . - T[412-423] . |
| Gene3D |
Prot-tyrosine_phosphatase-like (IPR029021) - T[511-799] 9.6E-100 - T[807-1044] 1.7E-43 |
| SUPERFAMILY |
Prot-tyrosine_phosphatase-like (IPR029021) - T[521-796] 1.15E-95 - T[837-1041] 3.96E-41 |
| SMART |
PTPase_domain (IPR000242) - T[540-799] 5.8E-107 - T[806-1035] 3.2E-21 |
| ProSiteProfiles |
PTPase_domain (IPR000242) - T[541-797] 51.664 - T[811-1033] 24.48 |
| Pfam |
PTPase_domain (IPR000242) - T[565-795] 5.5E-79 - T[826-1031] 1.1E-38 |
| PRINTS |
PTPase_domain (IPR000242) - T[592-599] 2.2E-34 - T[608-628] 2.2E-34 - T[691-708] 2.2E-34 - T[733-751] 2.2E-34 - T[764-779] 2.2E-34 - T[780-790] 2.2E-34 |
| SMART |
Tyr_Pase_cat (IPR003595) - T[692-796] 1.2E-32 - T[933-1032] 7.1E-21 |
| ProSiteProfiles |
TYR_PHOSPHATASE_dom (IPR000387) - T[714-788] 18.328 - T[952-1024] 15.561 |
| ProSitePatterns |
Tyr_Pase_AS (IPR016130) - T[736-746] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PTPRA_HUMAN | 28.478 % | 304 | 2.25E-89 |
| PTPRE_HUMAN | 35.009 % | 321 | 1.65E-96 |
| PTPRC_HUMAN | 31.14 % | 290 | 1.16E-81 |