- Transcript 'KH2012:KH.L65.21.v2....' >
- Transcript 'Moocci.CG.ELv1_2.S32...' >
- Transcript 'KH2012:KH.L35.11.v2....'
Transcript Model
Transcript Id
KH2012:KH.L35.11.v2.R.ND1-1
Possible name(s)
PTPRA; PTPRC; PTPRE
Gene model
Location
KhL35 [48,978 / 60,482]
Amino acid sequence
Length: 1,082
>KH.L35.11.v2.R.ND1-1
TKHNGAYTQRRMFNKLFIVSVWMLITQCYGQGPVTIVPYNGIELKFYAIRKTYEQAKTAC
ESDNAQLVVVKSQAMQDIITPHLDSTISYIAWGQYDYGVGYWMGLRKLAGANIHDYKALD
GTNYVNKPAYTNWNNVEPNALKSQLACAYMCPYNNVYGINGAYNWFTDSAFPNVSKGGWW
TFHCTQKNYYICQRAFCATNPCRYGSCVALATSYKCNCDPGYSGSLCGDDLCFPQPCLNN
GSCNRVPNTYSCSCVDGFIGRNCETDLCSPQPCQNGGSCNRVPGNYTCSCLNGFVGRNCE
TEYFFNVGDLCLIHVNSRGRKTFRESLSQCQSLNASLAIIKSSQVQTAILNHHNFGVGQT
WLGGFSNHSKWLWLDSSDMVYNNWLNGAPVVNDTNCVSLAPNGTWVHSYCEDKHGYACEK
SVDGRDLCSSSPCQNNATCISSGCNVHCVCTSGYMGSNCAMIVPRTGGAGTSSSTVYIAI
AVTCGLLLIVIVVLILYKRRTRPKSPKPIMMNANPPVEAVAYVNVIAPSENAYSSIDIHQ
GDVLYDDIATTSSPYLIRKDKFLQHFQTLAANEGKLCIEEFKLLAAASAKIEMQTIHGEN
NKGKNRFKNILPYDSTRVVLSTANGQSDYINGNYVDCYNQPHKYIATQGPLPKTETDFWR
MVWESKCRVIVMLTNLLEGNKRKCHKYWPEIGALGKHGDLIIECVNETSYGGYVIREMKV
TNNKTTRKLKQFHFTSWPDHNVPITTTSLHRFKCAVLDYHKSNQVDNSPIVVHCSAGAGR
TGTFIGFDSLMAEMDHRSCVNVFETVLAMRKQRVDMVQNSKQYLLLHKLVAEDCKIGNTD
FSVEELEERIQRLENWTIRENQVKHSNIKGAAYDASFVESYSESLEIIVAAGPTHESLEN
FWHAVTSNNVGTIVSLRSSQEERKLGFQFLPSQQPLMINDITIEEQTKSTSGCITDKSLM
ITTPRGKNMVRYFHFQTWDPDTVPNTTAELIDLVKRLQAQTGKGKLMIFCSDGINRSGAF
VALINLMERVNIEGSIDIFRTVKDLRDMRIGMVSTELLYKFLHNTMVDYVSTFQVYSNFG
CK
Nucleotide sequence
Length: 3,714
>KH2012:KH.L35.11.v2.R.ND1-1
TACAAAACATAACGGAGCTTATACACAAAGAAGAATGTTTAATAAACTGTTTATTGTTTC
TGTTTGGATGCTCATTACTCAGTGCTATGGCCAAGGACCTGTCACAATTGTACCATACAA
CGGGATTGAGCTGAAATTTTACGCTATTCGTAAAACATACGAGCAAGCCAAAACTGCTTG
TGAGTCCGACAACGCCCAGCTAGTAGTGGTGAAGAGTCAAGCAATGCAAGATATCATCAC
TCCACACCTCGATTCCACCATTAGTTACATTGCATGGGGACAATATGATTACGGTGTTGG
TTATTGGATGGGGCTCAGGAAATTAGCAGGTGCAAATATACACGACTACAAAGCTCTTGA
TGGTACCAACTACGTCAACAAGCCCGCATATACAAACTGGAACAATGTGGAACCGAACGC
TCTGAAGTCTCAATTAGCTTGTGCGTATATGTGTCCCTACAATAATGTGTATGGGATAAA
TGGAGCGTATAATTGGTTCACGGACAGCGCATTTCCCAACGTAAGTAAGGGTGGCTGGTG
GACCTTTCACTGCACACAGAAGAATTACTACATTTGTCAAAGAGCCTTTTGCGCAACGAA
CCCTTGTAGATACGGATCGTGCGTTGCTTTAGCGACGAGCTACAAATGTAATTGCGATCC
TGGTTACTCTGGATCTCTGTGTGGCGACGATCTATGCTTTCCCCAGCCTTGCCTGAATAA
TGGCAGTTGCAACAGAGTTCCCAACACTTACTCTTGCTCATGTGTGGATGGTTTTATTGG
AAGGAATTGTGAAACAGATCTATGCTCCCCCCAGCCTTGTCAGAATGGTGGGAGTTGTAA
CAGAGTTCCCGGCAACTACACTTGTTCATGCTTAAATGGCTTTGTGGGAAGGAATTGTGA
AACAGAATACTTCTTCAATGTTGGTGACCTTTGTCTCATCCATGTTAACAGCAGAGGAAG
AAAAACCTTCAGAGAATCTTTATCTCAATGCCAGTCGCTCAATGCTAGCCTTGCGATCAT
AAAAAGCAGTCAAGTCCAAACAGCCATACTTAACCACCACAACTTTGGTGTTGGTCAAAC
TTGGCTAGGTGGTTTTTCAAACCACTCAAAATGGCTCTGGCTTGATTCAAGTGATATGGT
GTACAACAACTGGTTAAATGGTGCACCAGTGGTTAATGATACAAACTGTGTTAGTTTAGC
TCCAAATGGAACATGGGTGCATTCTTATTGTGAAGATAAACACGGATATGCTTGTGAAAA
ATCAGTTGACGGAAGAGATCTTTGTTCCTCTTCTCCTTGTCAAAACAATGCAACATGTAT
CAGCAGTGGTTGTAATGTTCACTGTGTGTGTACATCTGGTTACATGGGATCTAACTGTGC
TATGATTGTACCACGAACTGGTGGTGCTGGAACTTCTAGTTCAACTGTGTACATTGCCAT
TGCAGTGACTTGTGGGTTGCTACTGATTGTCATAGTTGTCCTTATACTCTACAAACGAAG
GACTCGACCTAAATCACCTAAACCAATAATGATGAATGCTAATCCACCAGTTGAAGCGGT
TGCATATGTAAATGTAATTGCACCAAGCGAAAATGCTTATTCTAGCATTGATATCCACCA
AGGTGATGTTTTATACGATGACATTGCCACCACTTCAAGCCCGTACTTGATTAGGAAAGA
TAAATTTCTTCAGCACTTTCAAACCCTTGCTGCTAATGAAGGAAAACTGTGCATAGAAGA
GTTTAAATTACTTGCTGCTGCTTCAGCCAAGATAGAAATGCAAACAATTCATGGTGAAAA
CAACAAGGGAAAGAACAGATTCAAGAATATATTGCCATATGACAGCACACGAGTTGTATT
ATCCACTGCAAATGGGCAAAGTGATTATATTAATGGAAACTATGTGGATTGTTACAACCA
ACCCCATAAATACATTGCCACACAAGGCCCTCTTCCTAAAACTGAGACCGATTTTTGGAG
GATGGTTTGGGAGAGTAAGTGTCGCGTTATTGTGATGTTGACAAACTTATTGGAAGGAAA
TAAAAGGAAGTGTCACAAGTACTGGCCAGAGATTGGAGCATTGGGTAAACATGGAGATCT
TATAATAGAGTGCGTAAACGAAACTTCATATGGTGGATATGTGATTCGAGAGATGAAAGT
TACAAACAACAAGACCACACGAAAGTTAAAGCAGTTCCACTTCACATCATGGCCCGACCA
TAATGTGCCCATCACCACGACTTCACTTCACAGATTCAAATGTGCTGTGCTAGATTATCA
TAAATCAAACCAAGTAGACAACTCTCCTATTGTTGTTCATTGCAGTGCAGGAGCTGGTAG
AACTGGAACCTTCATTGGATTTGACAGTTTGATGGCTGAAATGGACCACAGATCATGTGT
TAACGTGTTTGAAACAGTGCTGGCTATGAGAAAGCAAAGAGTGGATATGGTTCAAAACTC
AAAACAATATTTACTTCTTCACAAATTGGTGGCGGAAGATTGTAAGATTGGAAACACTGA
TTTCTCTGTGGAAGAATTAGAAGAAAGAATTCAGCGACTTGAAAATTGGACAATTCGGGA
AAATCAGGTTAAACATTCCAACATCAAAGGAGCTGCATACGACGCTTCTTTCGTCGAGAG
TTACAGCGAAAGCCTGGAGATAATTGTAGCGGCTGGTCCCACTCATGAATCGCTTGAAAA
CTTCTGGCACGCTGTGACTTCCAACAACGTTGGAACAATTGTTTCGCTGCGAAGCTCGCA
GGAAGAAAGAAAACTTGGATTCCAATTCTTACCCTCACAACAACCATTGATGATTAATGA
CATCACAATTGAAGAACAAACTAAATCGACAAGTGGTTGCATCACAGACAAATCTTTGAT
GATTACAACACCAAGGGGGAAGAATATGGTGAGATACTTTCATTTCCAAACCTGGGATCC
AGACACTGTACCCAACACAACAGCAGAGTTGATTGATCTTGTTAAACGACTTCAAGCACA
GACTGGGAAAGGAAAACTTATGATATTTTGCAGTGATGGAATAAACCGCAGTGGTGCGTT
TGTTGCTCTTATTAACTTGATGGAGAGAGTTAACATTGAAGGAAGTATTGACATCTTTAG
AACTGTGAAGGATTTGAGAGATATGAGGATTGGGATGGTTTCTACAGAGCTACTTTACAA
ATTCCTTCACAACACCATGGTGGATTATGTTTCAACTTTTCAAGTTTACTCAAACTTCGG
ATGCAAATAGTTTAAGGAACAAGCAAATGAGCTTAACTTTTGTTGTGCTAGCTTGGTGAG
GGAGTTGGAAGTCGTTAGAACACACTTTTTTCCCTTTCACACAACTCGTACCCGCTTATG
AGTTACAATAAACGTTTGTTAATGATGATTTTCTAACAATTTACACAGCCCATTAGTGAC
CACTGGGGTTGGAAAAAATTTTCATTAAATGTGTGTGATGGAACATAAACAGTAACCACC
AGTGCCAAACTTTCTTATGATTTGTACTGATATATAAATTGACTGCTTTTGTATAAAATA
ACGAACTTTTTGATGGCAATGTTTCATCTGATATTCTCCCCCACATCCCACTGCTATTAT
TTTAATAATGTTAATTCAATCAGTGCTTTTTATTAAAAGGATGATTCTTATTAAACCGTT
TCATATTGGCCTGCATGTTTGTGAATAAACTCATTAGAAAATTCATGTTTAATC
| SUPERFAMILY |
CTDL_fold (IPR016187) - T[24-197] 5.6E-18 - T[293-422] 8.92E-23 |
| SMART |
C-type_lectin-like (IPR001304) - T[32-193] 8.1E-15 - T[299-419] 6.2E-20 |
| Gene3D |
C-type_lectin-like/link_sf (IPR016186) - T[37-194] 2.6E-19 - T[298-419] 7.3E-20 |
| ProSiteProfiles |
C-type_lectin-like (IPR001304) - T[39-193] 12.864 - T[307-419] 15.885 |
| Pfam |
C-type_lectin-like (IPR001304) - T[50-194] 7.4E-12 - T[320-420] 1.4E-11 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[193-228] 12.64 - T[229-261] 10.047 - T[264-300] 20.464 - T[424-460] 14.354 |
| SMART |
EGF-like_dom (IPR000742) - T[196-228] 2.0E-4 - T[231-264] 8.1E-5 - T[267-300] 1.0E-5 - T[427-460] 0.0021 |
| Pfam |
EGF-like_dom (IPR000742) - T[197-225] 1.6E-4 - T[232-262] 6.5E-7 - T[268-298] 1.3E-6 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[197-228] 0.15 - T[230-264] 0.0029 - T[266-300] 9.8E-4 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[288-299] . - T[288-299] . - T[448-459] . - T[448-459] . |
| Gene3D |
Prot-tyrosine_phosphatase-like (IPR029021) - T[548-835] 1.1E-99 - T[843-1080] 1.8E-43 |
| SUPERFAMILY |
Prot-tyrosine_phosphatase-like (IPR029021) - T[557-832] 1.23E-95 - T[873-1077] 4.1E-41 |
| SMART |
PTPase_domain (IPR000242) - T[576-835] 5.8E-107 - T[842-1071] 3.2E-21 |
| ProSiteProfiles |
PTPase_domain (IPR000242) - T[577-833] 51.664 - T[847-1069] 24.48 |
| Pfam |
PTPase_domain (IPR000242) - T[601-831] 5.8E-79 - T[862-1067] 1.2E-38 |
| PRINTS |
PTPase_domain (IPR000242) - T[628-635] 2.7E-34 - T[644-664] 2.7E-34 - T[727-744] 2.7E-34 - T[769-787] 2.7E-34 - T[800-815] 2.7E-34 - T[816-826] 2.7E-34 |
| SMART |
Tyr_Pase_cat (IPR003595) - T[728-832] 1.2E-32 - T[969-1068] 7.1E-21 |
| ProSiteProfiles |
TYR_PHOSPHATASE_dom (IPR000387) - T[750-824] 18.328 - T[988-1060] 15.561 |
| ProSitePatterns |
Tyr_Pase_AS (IPR016130) - T[772-782] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PTPRA_HUMAN | 28.478 % | 304 | 2.89E-89 |
| PTPRE_HUMAN | 35.009 % | 320 | 3.82E-96 |
| PTPRC_HUMAN | 31.19 % | 291 | 1.03E-81 |